RNA–Protein interactions for RNA: ENST00000370263.8

CHRNA4-201, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA4, Length 5,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-201ENST00000370263 DCUN1D4Q92564 292 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 KCNK6Q9Y257 313 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 THEGLP0DJG4 465 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 HLA-EP13747 358 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 GNRHRP30968 328 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 WDR5P61964 334 aaKnown RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 FRMPD2BQ6IN97 320 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 PLA2G15Q8NCC3 412 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 OR1J4Q8NGS1 313 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 DPF3Q92784 378 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 PGAP3Q96FM1 320 aaPredicted RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 SLC12A9Q9BXP2 914 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 NIPAL2Q9H841 368 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 GLTPQ9NZD2 209 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 PPP6CO00743 305 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 SOX9P48436 509 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 FPGSQ05932 587 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 FOXB2Q5VYV0 432 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 DPY19L2P1Q6NXN4 242 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 SAMD8Q96LT4 415 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 PCDHGA2Q9Y5H1 932 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 LCMT2O60294 686 aaKnown RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 CSTAP01040 98 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 PDGFAP04085 211 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 ASGR2P07307 311 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 TAS2R38P59533 333 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 KIAA1211LQ6NV74 962 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 DNAJC22Q8N4W6 341 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 OVCA2Q8WZ82 227 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 PRDM9Q9NQV7 894 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 ZNF226Q9NYT6 803 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 AK6Q9Y3D8 172 aaKnown RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 IFT172Q9UG01 1749 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 RNASET2O00584 256 aaKnown RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 B4GALT2O60909 372 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 ETV3P41162 512 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 RPS26P11Q5JNZ5 115 aaPredicted RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 SLC41A3Q96GZ6 507 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 G6PC3Q9BUM1 346 aa17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 RBFOX1Q9NWB1 397 aaKnown RBP17.13■□□□□ 0.33
CHRNA4-201ENST00000370263 EDDM13A0A1B0GTR0 161 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 ADORA3P0DMS8 318 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 ELNP15502 786 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 CREB3L2Q70SY1 520 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 ZNF551Q7Z340 670 aaPredicted RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 SVBPQ8N300 66 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 TREX1Q9NSU2 369 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 PHYHO14832 338 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 PBX2P40425 430 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 RAP2BP61225 183 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 AKR1C8PQ5T2L2 129 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 MANEALQ5VSG8 457 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 MAVSQ7Z434 540 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 OR5AK2Q8NH90 309 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 FN3KQ9H479 309 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 SLC28A3Q9HAS3 691 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 IL20RAQ9UHF4 553 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 RASD1Q9Y272 281 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 TPT1P13693 172 aaKnown RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 RRAS2P62070 204 aaPredicted RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 NKX6-1P78426 367 aaPredicted RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 SOX4Q06945 474 aaPredicted RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 FAPQ12884 760 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 PDGFRLQ15198 375 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 OR4K13Q8NH42 304 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 ELP4Q96EB1 424 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 NOX3Q9HBY0 568 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 SLAMF8Q9P0V8 285 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 C11orf98E9PRG8 122 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 RAB3DO95716 219 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 MT-ND4P03905 459 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 UBBP0CG47 229 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 UBCP0CG48 685 aaKnown RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 VSX2P58304 361 aaPredicted RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 TAGLNQ01995 201 aaKnown RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 COMTD1Q86VU5 262 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 BRIX1Q8TDN6 353 aaKnown RBP17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 BOLA1Q9Y3E2 137 aa17.12■□□□□ 0.33
CHRNA4-201ENST00000370263 RIDAP52758 137 aaKnown RBP17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 SEC13P55735 322 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 MAP4K2Q12851 820 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 DYRK1AQ13627 763 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 OXA1LQ15070 435 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 UPP1Q16831 310 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 KDELC1Q6UW63 502 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 LRRC25Q8N386 305 aaPredicted RBP17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 ROBO1Q9Y6N7 1651 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 M0R3H8 397 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 RTCAO00442 366 aaKnown RBP17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 UGDHO60701 494 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 LRFN4Q6PJG9 635 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 OR13C3Q8NGS6 347 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 SMARCD2Q92925 531 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 ZNF689Q96CS4 500 aaPredicted RBP17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 TMEM175Q9BSA9 504 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 CLMPQ9H6B4 373 aa17.11■□□□□ 0.33
CHRNA4-201ENST00000370263 GMDSO60547 372 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms