RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 FRKP42685 505 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-203ENST00000368439 ZNF630Q2M218 657 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-203ENST00000368439 GALNTL6Q49A17 601 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 SP5Q6BEB4 398 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-203ENST00000368439 LRIG3Q6UXM1 1119 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 EID3Q8N140 333 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 OR4N2Q8NGD1 307 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 OR5M9Q8NGP3 310 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 CLHC1Q8NHS4 586 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 RNF138Q8WVD3 245 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 CIDECQ96AQ7 238 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-203ENST00000368439 GNRHR2Q96P88 292 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 C20orf27Q9GZN8 174 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 SLC6A15Q9H2J7 730 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 ZNF395Q9H8N7 513 aaPredicted RBP17.33■□□□□ 0.36
CKS1B-203ENST00000368439 C15orf41Q9Y2V0 281 aa17.33■□□□□ 0.36
CKS1B-203ENST00000368439 WDR91A4D1P6 747 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 TM9SF1O15321 606 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 AKAP10O43572 662 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 ICOSLGO75144 302 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 HPNP05981 417 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 GDF1P27539 372 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 PTPN6P29350 595 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 SNTA1Q13424 505 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 TIGD3Q6B0B8 471 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 RTL6Q6ICC9 239 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 SLC30A6Q6NXT4 461 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 ZNF551Q7Z340 670 aaPredicted RBP17.32■□□□□ 0.36
CKS1B-203ENST00000368439 PACS2Q86VP3 889 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 NEIL3Q8TAT5 605 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 PPP3R2Q96LZ3 170 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 COL21A1Q96P44 957 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 LDAHQ9H6V9 325 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 GALNT9Q9HCQ5 603 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 B4GALT7Q9UBV7 327 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 FAM215AQ9Y5M1 114 aa17.32■□□□□ 0.36
CKS1B-203ENST00000368439 SNPHO15079 494 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 PDPK1O15530 556 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 PEX11AO75192 247 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 COQ9O75208 318 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 SKAP2O75563 359 aaPredicted RBP17.31■□□□□ 0.36
CKS1B-203ENST00000368439 REM1O75628 298 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 CLDN14O95500 239 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 SERPINE1P05121 402 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 HTR1EP28566 365 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 CDK9P50750 372 aaKnown RBP17.31■□□□□ 0.36
CKS1B-203ENST00000368439 PSPHP78330 225 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 CHI3L2Q15782 390 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 C6orf136Q5SQH8 315 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 CROCCP2Q86T23 111 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 SLC44A2Q8IWA5 706 aaPredicted RBP17.31■□□□□ 0.36
CKS1B-203ENST00000368439 SARAFQ96BY9 339 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 PPCDCQ96CD2 204 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 ADOQ96SZ5 270 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 OSBPL11Q9BXB4 747 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 CENPHQ9H3R5 247 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 METTL7AQ9H8H3 244 aa17.31■□□□□ 0.36
CKS1B-203ENST00000368439 MED12Q93074 2177 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 C2orf72A6NCS6 295 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 PRAMEF25A6NGN4 478 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 TMEM114B3SHH9 223 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 GNB5O14775 395 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ABCB7O75027 752 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ELAVL4P26378 380 aaKnown RBP17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ACVR2AP27037 513 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ASMTP46597 345 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 MASP1P48740 699 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 TRPC1P48995 793 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 PNLIPRP2P54317 469 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 NUP107P57740 925 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ABCE1P61221 599 aaKnown RBP17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ZNF155Q12901 538 aaPredicted RBP17.3■□□□□ 0.36
CKS1B-203ENST00000368439 BEND6Q5SZJ8 279 aaPredicted RBP17.3■□□□□ 0.36
CKS1B-203ENST00000368439 TMEM211Q6ICI0 200 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ANGPTL8Q6UXH0 198 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 LARP4Q71RC2 724 aaKnown RBP eCLIP17.3■□□□□ 0.366e-9■■■□□ 18.1
CKS1B-203ENST00000368439 ZNF781Q8N8C0 355 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 WDSUB1Q8N9V3 476 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 HOXB13Q92826 284 aaPredicted RBP17.3■□□□□ 0.36
CKS1B-203ENST00000368439 MTERF3Q96E29 417 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 SORT1Q99523 831 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 LMF2Q9BU23 707 aaKnown RBP17.3■□□□□ 0.36
CKS1B-203ENST00000368439 DDX18Q9NVP1 670 aaKnown RBP17.3■□□□□ 0.36
CKS1B-203ENST00000368439 NTMQ9P121 344 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ATP6V1HQ9UI12 483 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 ACAD8Q9UKU7 415 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 HCFC1P51610 2035 aa17.3■□□□□ 0.36
CKS1B-203ENST00000368439 NUP214P35658 2090 aaPredicted RBP17.29■□□□□ 0.36
CKS1B-203ENST00000368439 ADGRG4Q8IZF6 3080 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 B4DXG7 233 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 C19orf84I3L1E1 186 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 ZWINTO95229 277 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 HSPA4LO95757 839 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 MAP3K8P41279 467 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 GAS1P54826 345 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 CRYZQ08257 329 aaKnown RBP17.29■□□□□ 0.36
CKS1B-203ENST00000368439 HSPB3Q12988 150 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 GAB1Q13480 694 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 ATP6AP1LQ52LC2 224 aa17.29■□□□□ 0.36
CKS1B-203ENST00000368439 ZNF585AQ6P3V2 769 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms