RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 NANSQ9NR45 359 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 NUP50Q9UKX7 468 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 PLEKHA6Q9Y2H5 1048 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 CBFA2T3O75081 653 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 SNAP29O95721 258 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 OXSR1O95747 527 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 ADAP00813 363 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 NDUFA5Q16718 116 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 THRSPQ92748 146 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 ENPP4Q9Y6X5 453 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 GXYLT2A0PJZ3 443 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 RNASET2O00584 256 aaKnown RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 LHCGRP22888 699 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 CEBPGP53567 150 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 TRA2BP62995 288 aaKnown RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 NKAPLQ5M9Q1 402 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 COL13A1Q5TAT6 717 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 VTCN1Q7Z7D3 282 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 OR5T2Q8NGG2 359 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 OR9A2Q8NGT5 310 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 OR5K2Q8NHB8 316 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 FGF14Q92915 247 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 TMED9Q9BVK6 235 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 TRAPPC13A5PLN9 417 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 H0YAE9 185 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 SRPX2O60687 465 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 NAA10P41227 235 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 SOX2P48431 317 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 ABCA11PQ4W5N1 156 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 FAM109BQ6ICB4 259 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 OR4C15Q8NGM1 316 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 ZC3HAV1LQ96H79 300 aaKnown RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 DCSTAMPQ9H295 470 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 TM7SF3Q9NS93 570 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 MMP17Q9ULZ9 603 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 ARNTLO00327 626 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 NARSO43776 548 aaKnown RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 PGFP49763 221 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 EEF1A1P68104 462 aaKnown RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 OTUD1Q5VV17 481 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 CEP76Q8TAP6 659 aa10.95□□□□□ -0.66
SYNE1-204ENST00000367248 SPRYD4Q8WW59 207 aaPredicted RBP10.95□□□□□ -0.66
SYNE1-204ENST00000367248 CD46P15529 392 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 NDUFV2P19404 249 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 POU3F2P20265 443 aaPredicted RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 AHRP35869 848 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 BEND4Q6ZU67 534 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PIK3R3Q92569 461 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PITX2Q99697 317 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 MAGIXQ9H6Y5 334 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 IL37Q9NZH6 218 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 IL20RAQ9UHF4 553 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PLEKHM1Q9Y4G2 1056 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 XPNPEP2O43895 674 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 CLCA4Q14CN2 919 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ALG10BQ5I7T1 473 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 TMEM201Q5SNT2 666 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 LRFN4Q6PJG9 635 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PDSS2Q86YH6 399 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 HDAC2Q92769 488 aaKnown RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 MAL2Q969L2 176 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PHF12Q96QT6 1004 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 FAM86C1Q9NVL1 165 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PCDHGA3Q9Y5H0 932 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ITIH1P19827 911 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 MAPK3P27361 379 aaPredicted RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 VEZF1Q14119 521 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 NADK2Q4G0N4 442 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 CLEC14AQ86T13 490 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 PSD4Q8NDX1 1056 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 EGLN2Q96KS0 407 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ZNF559Q9BR84 538 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 SMOC1Q9H4F8 434 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 TJP1Q07157 1748 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ACPPP15309 386 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 CFL1P23528 166 aaKnown RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 F8A1P23610 371 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 CD27P26842 260 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 GCAP28676 217 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 IMPA1P29218 277 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 FASLGP48023 281 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 RACK1P63244 317 aaKnown RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 EXOSC7Q15024 291 aaKnown RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 FAM189A2Q15884 450 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 WBP2Q969T9 261 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 CUTCQ9NTM9 273 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 B4GALT3O60512 393 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 C7P10643 843 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 SRFP11831 508 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 HK3P52790 923 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 GAS6Q14393 721 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 TLDC1Q6P9B6 456 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 OR9K2Q8NGE7 335 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 TNFAIP8L1Q8WVP5 186 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 INTS6Q9UL03 887 aaKnown RBP10.94□□□□□ -0.66
SYNE1-204ENST00000367248 TMEM14AQ9Y6G1 99 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ST3GAL4Q11206 333 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ZNF773Q6PK81 442 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 ENPP6Q6UWR7 440 aa10.94□□□□□ -0.66
SYNE1-204ENST00000367248 Q6ZS52 159 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms