RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 EPHA1P21709 976 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NUDT1P36639 197 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 BMXP51813 675 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 FXYD4P59646 89 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 MAP2K5Q13163 448 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NANPQ8TBE9 248 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NDRG1Q92597 394 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CENPOQ9BU64 300 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CCM2LQ9NUG4 571 aaPredicted RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ANKRD34BA5PLL1 514 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 OR51F1A6NGY5 319 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SOCS2O14508 198 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ADH5P11766 374 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ETV5P41161 510 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 GPR4P46093 362 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 NRLP54845 237 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 LAPTM4AQ15012 233 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ABHD15Q6UXT9 468 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF704Q6ZNC4 412 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TAC4Q86UU9 113 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TICAM1Q8IUC6 712 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 LRRC25Q8N386 305 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 OR5D14Q8NGL3 314 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TFGQ92734 400 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ESAMQ96AP7 390 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SEC14L6B5MCN3 397 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 BDKRB1P46663 353 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 APOFQ13790 326 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 NOCTQ9UK39 431 aaKnown RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 STK17BO94768 372 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 CKMT1AP12532 417 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 PRKACGP22612 351 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF74Q16587 644 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 KIAA1143Q96AT1 154 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TEPSINQ96N21 525 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 HDHD5Q9BXW7 423 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 FAM212BQ9NTI7 297 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SNRNP70P08621 437 aaKnown RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 PDLIM3Q53GG5 364 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ARSIQ5FYB1 569 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 MAP1SQ66K74 1059 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TBC1D20Q96BZ9 403 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TRIB3Q96RU7 358 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 NT5DC2Q9H857 520 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 CDHR4A6H8M9 788 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 DLX3O60479 287 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TP53P04637 393 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 UBE2NP61088 152 aaKnown RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ACY1Q03154 408 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM139Q8IV31 216 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF417Q8TAU3 575 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 FAM46AQ96IP4 442 aaKnown RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ASB3Q9Y575 518 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TECPR2O15040 1411 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 A0A0D9SG52 128 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 CD300LBA8K4G0 201 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 HTRA4P83105 476 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 EEF1DP3Q658K8 133 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 RFPL4BQ6ZWI9 263 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 KBTBD6Q86V97 674 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 NPIPA7E9PJI5 369 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 NPIPA8P0DM63 369 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SHMT2P34897 504 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 NFATC2Q13469 925 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ESCO2Q56NI9 601 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ADGRF1Q5T601 910 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 PAPD5Q8NDF8 572 aaKnown RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF317Q96PQ6 595 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 HBE1P02100 147 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SFRP4Q6FHJ7 346 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 GTF2H5Q6ZYL4 71 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TPRA1Q86W33 373 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TOMM40LQ969M1 308 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 C3P01024 1663 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SYT7O43581 403 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 GBAP04062 536 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 WDR4P57081 412 aaKnown RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 UBE2KP61086 200 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 CNN3Q15417 329 aaKnown RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 NKPD1Q17RQ9 610 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 CNIH2Q6PI25 160 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ZFAND4Q86XD8 727 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ARL14EPQ8N8R7 260 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 IL31RAQ8NI17 732 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ST7LQ8TDW4 575 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF587Q96SQ5 575 aaPredicted RBP8.86□□□□□ -0.99
VPS13A-203ENST00000360280 C8orf89P0DMQ9 161 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 PNMTP11086 282 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 BAGE3Q86Y29 109 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 BAGE2Q86Y30 109 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 TSSK2Q96PF2 358 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 OARD1Q9Y530 152 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SYPP08247 313 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 GPR50Q13585 617 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 UGCGQ16739 394 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF678Q5SXM1 525 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SLC30A7Q8NEW0 376 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 SEMA6DQ8NFY4 1073 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 OR8D2Q9GZM6 311 aa8.86□□□□□ -0.99
VPS13A-203ENST00000360280 PADI3Q9ULW8 664 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms