RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 PDGFDQ9GZP0 370 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RCE1Q9Y256 329 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 KLK4Q9Y5K2 254 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 KPTNQ9Y664 436 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 A0A0A6YYJ9 748 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 E2F3O00716 465 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ALDOCP09972 364 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 LAMP1P11279 417 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PIM1P11309 404 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 WEE1P30291 646 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 S100A11P31949 105 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 FRKP42685 505 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 IL10RBQ08334 325 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SLAMF1Q13291 335 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 DUSP7Q16829 419 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PLK5Q496M5 336 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PRMT6Q96LA8 375 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ADAD1Q96M93 576 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 DOK1Q99704 481 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TRAF4Q9BUZ4 470 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SLC25A32Q9H2D1 315 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 MAFBQ9Y5Q3 323 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 WTIPA6NIX2 430 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 NUDT19A8MXV4 375 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 LGALS8O00214 317 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 BEST1O76090 585 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TGM1P22735 817 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ETV6P41212 452 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 GDF5P43026 501 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PPT1P50897 306 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM132BQ14DG7 1078 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 C18orf21Q32NC0 220 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ADAMTS14Q8WXS8 1223 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 FAM46BQ96A09 425 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 MINDY3Q9H8M7 445 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 MYOZ2Q9NPC6 264 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 MYO5AQ9Y4I1 1855 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ARL5CA6NH57 179 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SEC14L5O43304 696 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 POLR2IP36954 125 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CLDN8P56748 225 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 H3F3CQ6NXT2 135 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM135Q86UB9 458 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF546Q86UE3 836 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 OR52H1Q8NGJ2 320 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PSMG2Q969U7 264 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 MICU1Q9BPX6 476 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 EFCAB11Q9BUY7 163 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PURGQ9UJV8 347 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CIB4A0PJX0 185 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 GGT3PA6NGU5 568 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PIP5K1CO60331 668 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RABGGTBP53611 331 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 WDR5P61964 334 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ADARB1P78563 741 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ARHGAP11AQ6P4F7 1023 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SUN3Q8TAQ9 357 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 POC1BQ8TC44 478 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SLC41A3Q96GZ6 507 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM41AQ96HV5 264 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 C20orf27Q9GZN8 174 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PIGMQ9H3S5 423 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TAS2R8Q9NYW2 309 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 OR2AG2A6NM03 316 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 D6RAR5 112 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 K7EPK0 472 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 GRIN3BO60391 1043 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TFPIP10646 304 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 GNSP15586 552 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TIA1P31483 386 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 HNF1BP35680 557 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 GDNFP39905 211 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 NR0B1P51843 470 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ACTC1P68032 377 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ACTA1P68133 377 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CES4AQ5XG92 561 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 MAMDC4Q6UXC1 1216 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 FAM71E2Q8N5Q1 922 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ELP5Q8TE02 316 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 PGLYRP2Q96PD5 576 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TMEM175Q9BSA9 504 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 LSM5Q9Y4Y9 91 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF736B4DX44 427 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 WASH3PC4AMC7 463 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TCRBP04435 133 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 HSD3B1P14060 373 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 HSD3B2P26439 372 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 NDUFV1P49821 464 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 GPLD1P80108 840 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ZNF585AQ6P3V2 769 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 TMPRSS12Q86WS5 348 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 UROC1Q96N76 676 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 YIPF4Q9BSR8 244 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 SLC6A16Q9GZN6 736 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 VAPAQ9P0L0 249 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CST3P01034 146 aaPredicted RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 RD3LP0DJH9 198 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 ATP5C1P36542 298 aaKnown RBP5.78□□□□□ -1.48
VPS13B-203ENST00000358544 CCR8P51685 355 aa5.78□□□□□ -1.48
VPS13B-203ENST00000358544 DPY19L2P1Q6NXN4 242 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms