RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.1□□□□□ -0.15
TPM1-206ENST00000358278 C19orf48Q6RUI8 117 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 ISLR2Q6UXK2 745 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 NPSR1Q6W5P4 371 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 LINC00696Q6ZRV3 163 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 COX18Q8N8Q8 333 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 ZNF441Q8N8Z8 693 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 OR52N2Q8NGI0 321 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 OR7D2Q96RA2 312 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 RASL10BQ96S79 203 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 ARHGAP9Q9BRR9 750 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 PRORYQ9H606 182 aa14.1□□□□□ -0.15
TPM1-206ENST00000358278 YARS2Q9Y2Z4 477 aaKnown RBP14.1□□□□□ -0.15
TPM1-206ENST00000358278 NINQ8N4C6 2090 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 PRRC2CQ9Y520 2896 aaKnown RBP14.09□□□□□ -0.15
TPM1-206ENST00000358278 DUXAA6NLW8 204 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 MKRN2OSH3BPM6 223 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 MAN1A2O60476 641 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 UNC5CO95185 931 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 SOX11P35716 441 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 SSR4P51571 173 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 POLE2P56282 527 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 MTPNP58546 118 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 RUNDC3AQ59EK9 446 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 COX20Q5RI15 118 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 PRR22Q8IZ63 422 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 BEST3Q8N1M1 668 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 ARMC10Q8N2F6 343 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 TMEM156Q8N614 296 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 MIPOL1Q8TD10 442 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 ASB15Q8WXK1 588 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 CDS1Q92903 461 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 HSPBAP1Q96EW2 488 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 STACQ99469 402 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 CPPED1Q9BRF8 314 aaPredicted RBP14.09□□□□□ -0.15
TPM1-206ENST00000358278 THUMPD3Q9BV44 507 aaKnown RBP14.09□□□□□ -0.15
TPM1-206ENST00000358278 TRIM8Q9BZR9 551 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 SERHL2Q9H4I8 314 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 ZNF552Q9H707 407 aaPredicted RBP14.09□□□□□ -0.15
TPM1-206ENST00000358278 DUSP22Q9NRW4 184 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 STMN3Q9NZ72 180 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 PCDHGB3Q9Y5G1 929 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 CACNA1BQ00975 2339 aa14.09□□□□□ -0.15
TPM1-206ENST00000358278 SOX30O94993 753 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 NKX2-2O95096 273 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 AGR2O95994 175 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 ABCD3P28288 659 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 KRT20P35900 424 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 MAP3K8P41279 467 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 RFX3P48380 749 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 PSPHP78330 225 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 TXNL4AP83876 142 aaKnown RBP14.08□□□□□ -0.16
TPM1-206ENST00000358278 PLCXD2Q0VAA5 305 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 FADDQ13158 208 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 RGNQ15493 299 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 COL28A1Q2UY09 1125 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 PIGGQ5H8A4 983 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 ATAD3BQ5T9A4 648 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 NANOGP8Q6NSW7 305 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 HACD2Q6Y1H2 254 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 HORMAD2Q8N7B1 307 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 PIK3R3Q92569 461 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 HOXB13Q92826 284 aaPredicted RBP14.08□□□□□ -0.16
TPM1-206ENST00000358278 RMND5BQ96G75 393 aaPredicted RBP14.08□□□□□ -0.16
TPM1-206ENST00000358278 SH3GL1Q99961 368 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 PIGUQ9H490 435 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 IKZF5Q9H5V7 419 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 NANOGQ9H9S0 305 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 GIN1Q9NXP7 522 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 CBLCQ9ULV8 474 aa14.08□□□□□ -0.16
TPM1-206ENST00000358278 PCDHGA9Q9Y5G4 932 aaKnown RBP14.08□□□□□ -0.16
TPM1-206ENST00000358278 C15orf38-AP3S2A0A0A6YYH1 394 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 ASNA1O43681 348 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 OR12D1P0DN82 309 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 ETFAP13804 333 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 IL12BP29460 328 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 CASRP41180 1078 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 SOX3P41225 446 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 MAGEA8P43361 318 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 MAN2A2P49641 1150 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 TMED10P49755 219 aaKnown RBP14.07□□□□□ -0.16
TPM1-206ENST00000358278 ST13P50502 369 aaKnown RBP14.07□□□□□ -0.16
TPM1-206ENST00000358278 DSTNP60981 165 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 POU6F2P78424 691 aaPredicted RBP14.07□□□□□ -0.16
TPM1-206ENST00000358278 MFAP5Q13361 173 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 CYP27C1Q4G0S4 372 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 C16orf62Q7Z3J2 963 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 ARPINQ7Z6K5 226 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 SLC34A3Q8N130 599 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 SLC15A4Q8N697 577 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 OR4N2Q8NGD1 307 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 OR8J3Q8NGG0 315 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 XAGE5Q8WWM1 108 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 RAB8BQ92930 207 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 TMBIM1Q969X1 311 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 SLC35A4Q96G79 324 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 LMF1Q96S06 567 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 HOPXQ9BPY8 73 aaPredicted RBP14.07□□□□□ -0.16
TPM1-206ENST00000358278 EXD2Q9NVH0 621 aa14.07□□□□□ -0.16
TPM1-206ENST00000358278 NDE1Q9NXR1 346 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms