RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CNTN1Q12860 1018 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 GINS1Q14691 196 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ZNF284Q2VY69 593 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 HIST2H2AA3Q6FI13 130 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC8B1Q6J4K2 584 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 TCTN3Q6NUS6 607 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 BHLHB9Q6PI77 547 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ASB18Q6ZVZ8 466 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 LAS2Q8IYD9 372 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 GHDCQ8N2G8 530 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 OR6C4Q8NGE1 309 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 OR5D16Q8NGK9 328 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 OR8J1Q8NGP2 316 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ZNF480Q8WV37 535 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC6A18Q96N87 628 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 NRTNQ99748 197 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 PRR14Q9BWN1 585 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 TINAGL1Q9GZM7 467 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 HDHD2Q9H0R4 259 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 TTYH1Q9H313 450 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 MVB12BQ9H7P6 319 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 KCNK12Q9HB15 430 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 CD93Q9NPY3 652 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 STARD7Q9NQZ5 370 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 RBFOX1Q9NWB1 397 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ACTR10Q9NZ32 417 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 IL20RAQ9UHF4 553 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 EDARQ9UNE0 448 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 C5orf42Q9H799 3197 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLC22A23A1A5C7 686 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 SYNDIG1LA6NDD5 238 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 HEPACAM2A8MVW5 462 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ISM1B1AKI9 464 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ANHXE9PGG2 379 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 NEDD8-MDP1E9PL57 170 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ST8SIA5O15466 376 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 CA12O43570 354 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 UGDHO60701 494 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 SEMA7AO75326 666 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ECDO95905 644 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 PRKAR1AP10644 381 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 AVPR1BP47901 424 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 RAB8AP61006 207 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 MAP4K2Q12851 820 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 CRB2Q5IJ48 1285 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 CNIH2Q6PI25 160 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 SLCO4C1Q6ZQN7 724 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 RTL4Q6ZR62 310 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 FAM92BQ6ZTR7 304 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 IQCHQ86VS3 1027 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 NANOGP1Q8N7R0 232 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 RASGEF1AQ8N9B8 481 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 OR5T2Q8NGG2 359 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 ADAMTS19Q8TE59 1207 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 WDFY2Q96P53 400 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 RBM14Q96PK6 669 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 RBP7Q96R05 134 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 BRF2Q9HAW0 419 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 NDUFB11Q9NX14 153 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 LYARQ9NX58 379 aaKnown RBP7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 MLXQ9UH92 298 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 PRKAB1Q9Y478 270 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 PLXNA3P51805 1871 aa7.78□□□□□ -1.16
CDC42SE1-201ENST00000357235 C2orf92A0A1B0GVN3 265 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 E9PQ18 207 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 H7C2Y5 167 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 SEC14L5O43304 696 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC43A1O75387 559 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 ADAP00813 363 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 ARAFP10398 606 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 CELP19835 753 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 BUD31P41223 144 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 PXNP49023 591 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 EPHB3P54753 998 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 RIPPLY1Q0D2K3 151 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 CAMK1Q14012 370 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 GLYR1Q49A26 553 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 RNASE12Q5GAN4 147 aaKnown RBP7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 PROKR2Q8NFJ6 384 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 CYB5D2Q8WUJ1 264 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 C11orf24Q96F05 449 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 FCRL1Q96LA6 429 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 FNDC11Q9BVV2 318 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF222Q9UK12 451 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 MKL2Q9ULH7 1088 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 SPATA2Q9UM82 520 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 MGAT4BQ9UQ53 548 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 UNC80Q8N2C7 3258 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 A0A1W2PRU2 124 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 INMT-MINDY4F8WBC2 141 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 ABCD4O14678 606 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 SLC16A5O15375 505 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 GATCO43716 136 aaKnown RBP7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 POP4O95707 220 aaKnown RBP7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 TGM6O95932 706 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 NR2F1P10589 423 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 ZNF3P17036 446 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 SSTR2P30874 369 aa7.77□□□□□ -1.17
CDC42SE1-201ENST00000357235 SOX18P35713 384 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms