RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 CPNE6O95741 557 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 OTX2P32243 289 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 LUMP51884 338 aaPredicted RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 NSDHLQ15738 373 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 TMEM236Q5W0B7 351 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 C22orf42Q6IC83 251 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 ZNF695Q8IW36 515 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 SLC5A8Q8N695 610 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 CDRT4Q8N9R6 151 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 HUS1BQ8NHY5 278 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 C16orf78Q8WTQ4 265 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 ZFAND2BQ8WV99 257 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 TRUB1Q8WWH5 349 aaKnown RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 TBC1D20Q96BZ9 403 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 FOXRED1Q96CU9 486 aaPredicted RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 F2RL3Q96RI0 385 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 MYADMQ96S97 322 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 PINK1Q9BXM7 581 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 SDHAF2Q9NX18 166 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 SIX4Q9UIU6 781 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 MCTS1Q9ULC4 181 aaKnown RBP6.15□□□□□ -1.43
UPF2-201ENST00000356352 PRELID1Q9Y255 219 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 PCDHA9Q9Y5H5 950 aa6.15□□□□□ -1.43
UPF2-201ENST00000356352 COL14A1Q05707 1796 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 ZNF705EA8MWA4 302 aaPredicted RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 CASC3O15234 703 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 PRAF2O60831 178 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ZNF623O75123 536 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ATP6V1G1O75348 118 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SC5DO75845 299 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 KCNK5O95279 499 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CFHP08603 1231 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 TMEM225BP0DP42 221 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 AKR1C4P17516 323 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 RAB3AP20336 220 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 DRD1P21728 446 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ETV6P41212 452 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 HLCSP50747 726 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 RBPJQ06330 500 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 TMEM201Q5SNT2 666 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 HACD4Q5VWC8 232 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 STEAP4Q687X5 459 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MRPL21Q7Z2W9 205 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 ZNF610Q8N9Z0 462 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR51T1Q8NGJ9 327 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR5L1Q8NGL2 311 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ZNF417Q8TAU3 575 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 FAM174AQ8TBP5 190 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SLC17A9Q9BYT1 436 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 RNF38Q9H0F5 515 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 FBRSL1Q9HCM7 1045 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 APMAPQ9HDC9 416 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 IL20RAQ9UHF4 553 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR6C6A6NF89 314 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CD8B2A6NJW9 211 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 J3QRK9 145 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SHOXO15266 292 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SEC14L5O43304 696 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MAFKO60675 156 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GJB5O95377 273 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 MAS1P04201 325 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ALDOBP05062 364 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CD8BP10966 210 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OSMP13725 252 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 HNRNPA2B1P22626 353 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 HMGCLP35914 325 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ACVR1BP36896 505 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 DIO3P55073 304 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ZNF616Q08AN1 781 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 EEF1A1P5Q5VTE0 462 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 PNCKQ6P2M8 343 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 FAM198BQ6UWH4 519 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 LCTLQ6UWM7 567 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 KLHDC8AQ8IYD2 350 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GDPD1Q8N9F7 314 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GALNT6Q8NCL4 622 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR9A2Q8NGT5 310 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 FIBINQ8TAL6 211 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 HYLS1Q96M11 299 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 ZNF587Q96SQ5 575 aaPredicted RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 ARL6Q9H0F7 186 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR10A5Q9H207 317 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 OR10A2Q9H208 303 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GPN2Q9H9Y4 310 aaPredicted RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 FAM118AQ9NWS6 357 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 TP53TG5Q9Y2B4 290 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SLC35A3Q9Y2D2 325 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 A0A0J9YY10 115 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 TVP23AA6NH52 213 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 TYROBPO43914 113 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 STC2O76061 302 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 AMY2AP04746 511 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 PROS1P07225 676 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 CKMT1AP12532 417 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 UGT2B7P16662 529 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 GKP32189 559 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SPINT3P49223 89 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 SHC2P98077 582 aa6.14□□□□□ -1.43
UPF2-201ENST00000356352 EIF2B1Q14232 305 aaKnown RBP6.14□□□□□ -1.43
UPF2-201ENST00000356352 LCN8Q6JVE9 175 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms