RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 EPHA5P54756 1037 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 EXOSC2Q13868 293 aaKnown RBP12.82□□□□□ -0.36
TRIM4-203ENST00000355947 CDONQ4KMG0 1287 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 C9orf64Q5T6V5 341 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 FAM92BQ6ZTR7 304 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 TMEM25Q86YD3 366 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 KLHL36Q8N4N3 616 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 GALNT6Q8NCL4 622 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 NARS2Q96I59 477 aaKnown RBP12.82□□□□□ -0.36
TRIM4-203ENST00000355947 ATF6BQ99941 703 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 OR51J1Q9H342 316 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 NIPAL2Q9H841 368 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 HCN3Q9P1Z3 774 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 DIMT1Q9UNQ2 313 aaKnown RBP12.82□□□□□ -0.36
TRIM4-203ENST00000355947 RABL2BQ9UNT1 228 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 OTOFQ9HC10 1997 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 ATG2BQ96BY7 2078 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 PSMD9O00233 223 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 SRPRAP08240 638 aaKnown RBP12.82□□□□□ -0.36
TRIM4-203ENST00000355947 SNRPBP14678 240 aaKnown RBP12.82□□□□□ -0.36
TRIM4-203ENST00000355947 CLDN20P56880 219 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 PCDH1Q08174 1060 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 ZBTB37Q5TC79 503 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 FAAP20Q6NZ36 180 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 PRICKLE2Q7Z3G6 844 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 C9orf62Q8N4C0 152 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 AMER3Q8N944 861 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 ZBTB44Q8NCP5 570 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 RAD51AP1Q96B01 352 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 OR10A4Q9H209 315 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 XKR8Q9H6D3 395 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 METTL17Q9H7H0 456 aaPredicted RBP12.82□□□□□ -0.36
TRIM4-203ENST00000355947 CHST2Q9Y4C5 530 aa12.82□□□□□ -0.36
TRIM4-203ENST00000355947 PGRMC2O15173 223 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 MID1O15344 667 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 RECKO95980 971 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 LIMS3P0CW19 117 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 LIMS4P0CW20 117 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 TRAPPC2P0DI81 140 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 TRAPPC2BP0DI82 140 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 PTHLHP12272 177 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CPEP16870 476 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 EPHB3P54753 998 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF628Q5EBL2 1059 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 GDPD4Q6W3E5 623 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CEACAM19Q7Z692 300 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 GRAMD2AQ8IUY3 354 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 NRMQ8IXM6 262 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF527Q8NB42 609 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 OR11H7Q8NGC8 314 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 OR5AR1Q8NGP9 310 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 DNAJA4Q8WW22 397 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 SMPDL3AQ92484 453 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 TMEM169Q96HH4 297 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 MS4A3Q96HJ5 214 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 WDFY2Q96P53 400 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 FAIM2Q9BWQ8 316 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 BRD7Q9NPI1 651 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 NLGN3Q9NZ94 848 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 SPG21Q9NZD8 308 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 SCML1Q9UN30 329 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 TMEM5Q9Y2B1 443 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 GBF1Q92538 1859 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 DAPL1A0PJW8 107 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 K7ESM1 405 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CHP2O43745 196 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 PIP5K1CO60331 668 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 SOCS5O75159 536 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CTGFP29279 349 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 RGS8P57771 180 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 SNRPGP62308 76 aaKnown RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CAMK1Q14012 370 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CCSAPQ6IQ19 270 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 VRK2Q86Y07 508 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 MSLNLQ96KJ4 702 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 ORAI3Q9BRQ5 295 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 A0A1W2PS29 197 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 PRODHO43272 600 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 PQBP1O60828 265 aaKnown RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 ARHGEF15O94989 841 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 POP4O95707 220 aaKnown RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CFDP00746 253 aaPredicted RBP12.81□□□□□ -0.36
TRIM4-203ENST00000355947 PLATP00750 562 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 ALDOBP05062 364 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 MPC1LP0DKB6 136 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 NOS3P29474 1203 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 TRIM23P36406 574 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 MAPK8P45983 427 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CRHR2Q13324 411 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CDKN3Q16667 212 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF697Q5TEC3 545 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 SLC25A25Q6KCM7 469 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 ZNF613Q6PF04 617 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 TEX261Q6UWH6 196 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 CFAP77Q6ZQR2 320 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 LINGO2Q7L985 606 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 GPR155Q7Z3F1 870 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 GLRX5Q86SX6 157 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 OR8D4Q8NGM9 314 aa12.81□□□□□ -0.36
TRIM4-203ENST00000355947 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms