RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SPANXN2Q5MJ10 180 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 SLC27A4Q6P1M0 643 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 WDR53Q7Z5U6 358 aaPredicted RBP20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 MRGPREQ86SM8 312 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 CLIP4Q8N3C7 705 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 TM4SF19Q96DZ7 209 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 C10orf90Q96M02 699 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF582Q96NG8 517 aaPredicted RBP20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 SERINC2Q96SA4 455 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 GPA33Q99795 319 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 QRSL1Q9H0R6 528 aaKnown RBP20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 STUB1Q9UNE7 303 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 A0A1W2PS29 197 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 TNFSF14O43557 240 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 EML2O95834 649 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 CCNYL3P0C7X3 344 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 TNFRSF17Q02223 184 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 FAM214AQ32MH5 1076 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 HEPHL1Q6MZM0 1159 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 FBXO42Q6P3S6 717 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 HMGN2P46Q86SG4 172 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 KAT2AQ92830 837 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 FGF11Q92914 225 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 CACYBPQ9HB71 228 aaKnown RBP20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 NDUFB11Q9NX14 153 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 LOC110117498-PIK3R3F6TDL0 507 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 TNFRSF10CO14798 259 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 TBX1O43435 398 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 KLF8O95600 359 aaPredicted RBP20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 COL9A1P20849 921 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 CPN2P22792 545 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 AK4P27144 223 aaPredicted RBP20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 TLX1P31314 330 aaPredicted RBP20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 CLDN2P57739 230 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 CDC73Q6P1J9 531 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF730Q6ZMV8 503 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 RASSF6Q6ZTQ3 369 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 VRK2Q86Y07 508 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 TOR1AIP2Q8NFQ8 470 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 OR4K14Q8NGD5 310 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 OR52I1Q8NGK6 324 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 OR52P1PQ8NH57 321 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 TMEM163Q8TC26 289 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 PIK3R3Q92569 461 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 DIO2Q92813 273 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 MS4A4EQ96PG1 132 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 SLC38A2Q96QD8 506 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 ASPNQ9BXN1 380 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 MTHFD2LQ9H903 347 aaPredicted RBP20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 EXOSC4Q9NPD3 245 aaKnown RBP20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 CTPS2Q9NRF8 586 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 C5orf42Q9H799 3197 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 AP3D1O14617 1153 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 PRODHO43272 600 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 SMIM10L1P0DMW3 83 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF10P21506 573 aaPredicted RBP20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 RAB40BQ12829 278 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 C3orf38Q5JPI3 329 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 BCDIN3DQ7Z5W3 292 aaKnown RBP20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 FLCNQ8NFG4 579 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 SLC35A4Q96G79 324 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 SMIM10Q96HG1 83 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 CNPPD1Q9BV87 410 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 SAP130Q9H0E3 1048 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF229Q9UJW7 825 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 SSR3Q9UNL2 185 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF232Q9UNY5 417 aa20.86■□□□□ 0.93
NKX2-1-201ENST00000354822 SNRNP200O75643 2136 aaKnown RBP20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 GOLGA4Q13439 2230 aaKnown RBP20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 FAM170BA6NMN3 283 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 SOX3P41225 446 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 ACTR1BP42025 376 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 CRYBB2P43320 205 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 ACTR1AP61163 376 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 MFSD12Q6NUT3 480 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 SLC36A4Q6YBV0 504 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 PRICKLE2Q7Z3G6 844 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 RD3Q7Z3Z2 195 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 KIF18BQ86Y91 864 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 PIGXQ8TBF5 258 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 ZG16BQ96DA0 208 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 TEX12Q9BXU0 123 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 TWSG1Q9GZX9 223 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 KCMF1Q9P0J7 381 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 HBQ1P09105 142 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 ACP2P11117 423 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 MYL12AP19105 171 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 DLX2Q07687 328 aaPredicted RBP20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 DECR1Q16698 335 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 STEAP3Q658P3 488 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 CCDC190Q86UF4 302 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 CADM3Q8N126 398 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 OR2A5Q96R48 311 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 FGF20Q9NP95 211 aaPredicted RBP20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 SEMA4GQ9NTN9 838 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 PTGFRNQ9P2B2 879 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 ANKMY1Q9P2S6 941 aa20.85■□□□□ 0.93
NKX2-1-201ENST00000354822 ATG2BQ96BY7 2078 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 B3GALT2O43825 422 aa20.84■□□□□ 0.93
NKX2-1-201ENST00000354822 STAT5AP42229 794 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms