RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 FAM240BA0A1B0GVZ2 78 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 PEX11BO96011 259 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 CELP19835 753 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 CSNK1G2P78368 415 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 METTL4Q8N3J2 472 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 HORMAD2Q8N7B1 307 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 AGBL5Q8NDL9 886 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ADAMTS18Q8TE60 1221 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 SLC41A3Q96GZ6 507 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 LRR1Q96L50 414 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ORAI3Q9BRQ5 295 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 PDCD10Q9BUL8 212 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 SMOXQ9NWM0 555 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ZNF222Q9UK12 451 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 TNS1Q9HBL0 1735 aaKnown RBP12.92□□□□□ -0.34
SMC6-201ENST00000351948 SLC5A10A0PJK1 596 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 H0YIV9 168 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 FBP2O00757 339 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 GPR75O95800 540 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 SERPINA3P01011 423 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 PRKAR1AP10644 381 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 BNIP3Q12983 259 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 HSF5Q4G112 596 aaPredicted RBP12.92□□□□□ -0.34
SMC6-201ENST00000351948 BCL7AQ4VC05 210 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 AGBL4Q5VU57 503 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 PLPP6Q8IY26 295 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ARL14Q8N4G2 192 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 MUTYHQ9UIF7 546 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ENPP4Q9Y6X5 453 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 VSTM2BA6NLU5 285 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ZNF670-ZNF695F2Z2N8 137 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 RASAL1O95294 804 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 CRISP1P54107 249 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ZNF33BQ06732 778 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 VRK2Q86Y07 508 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ENDOVQ8N8Q3 282 aaKnown RBP12.92□□□□□ -0.34
SMC6-201ENST00000351948 ZFP41Q8N8Y5 198 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 ZSCAN1Q8NBB4 408 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 MFSD9Q8NBP5 474 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 TCTN2Q96GX1 697 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 GPR78Q96P69 363 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 SECISBP2Q96T21 854 aaKnown RBP12.92□□□□□ -0.34
SMC6-201ENST00000351948 TUBB1Q9H4B7 451 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 TMEM181Q9P2C4 612 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 AHRP35869 848 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 TBC1D25Q3MII6 688 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 GTF2IRD2BQ6EKJ0 949 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 SYCE2Q6PIF2 218 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 GTF2IRD2Q86UP8 949 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 RAB2BQ8WUD1 216 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 NSMAFQ92636 917 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 CFHR5Q9BXR6 569 aa12.92□□□□□ -0.34
SMC6-201ENST00000351948 LOXHD1Q8IVV2 1947 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 KRBA1A5PL33 1030 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 AK1P00568 194 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 TOR1AIP2Q8NFQ8 470 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 OR5T3Q8NGG3 340 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 OR52E2Q8NGJ4 325 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 FCGR1BQ92637 280 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 TEX37Q96LM6 180 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 ERVK-18Q9QC07 812 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 RIMS3Q9UJD0 308 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 TRBV11-1A0A0K0K1C0 115 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 G3V3Y1 287 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 H0YC42 278 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 SYNGR4O95473 234 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 ECDO95905 644 aaPredicted RBP12.91□□□□□ -0.34
SMC6-201ENST00000351948 GPR143P51810 404 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 SELENOWP63302 87 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 GALK2Q01415 458 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 GAS6Q14393 721 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 DCST2Q5T1A1 773 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 MSANTD1Q6ZTZ1 278 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 IGFN1Q86VF2 1251 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 CHMP1AQ9HD42 196 aaPredicted RBP12.91□□□□□ -0.34
SMC6-201ENST00000351948 TRIM36Q9NQ86 728 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 ATG4BQ9Y4P1 393 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 SPTA1P02549 2419 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 ASXL3Q9C0F0 2248 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 CSN2P05814 226 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 HSF2Q03933 536 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 TMEM80Q96HE8 168 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 COQ10AQ96MF6 247 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 LYSMD1Q96S90 227 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 SLC29A1Q99808 456 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 DCSTAMPQ9H295 470 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 EURLQ9NYK6 297 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 HS3ST3A1Q9Y663 406 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 SNPHO15079 494 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 NOS1APO75052 506 aaPredicted RBP12.91□□□□□ -0.34
SMC6-201ENST00000351948 C8BP07358 591 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 IL9P15248 144 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 GABRG2P18507 467 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 LINGO2Q7L985 606 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 KCTD7Q96MP8 289 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 ITPAQ9BY32 194 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 B4GALT7Q9UBV7 327 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 AASSQ9UDR5 926 aa12.91□□□□□ -0.34
SMC6-201ENST00000351948 STSP08842 583 aa12.9□□□□□ -0.34
SMC6-201ENST00000351948 RAB14P61106 215 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms