RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 GABRG3Q99928 467 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 ANKRA2Q9H9E1 313 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 POLMQ9NP87 494 aaPredicted RBP20.75■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D29Q9UFV1 150 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 SSR3Q9UNL2 185 aa20.75■□□□□ 0.91
UPF3A-201ENST00000351487 GPR55Q9Y2T6 319 aaPredicted RBP20.75■□□□□ 0.91
UPF3A-201ENST00000351487 CAB39Q9Y376 341 aaPredicted RBP20.75■□□□□ 0.91
UPF3A-201ENST00000351487 DLGAP3O95886 979 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 HOXC4P09017 264 aaPredicted RBP20.74■□□□□ 0.91
UPF3A-201ENST00000351487 ETV5P41161 510 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 ETV1P50549 477 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 RORCP51449 518 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 KIAA1024LP59773 190 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 BNC1Q01954 994 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 RAB40BQ12829 278 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 TMEM196Q5HYL7 178 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 PARM1Q6UWI2 310 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 GALNT6Q8NCL4 622 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 OR8D4Q8NGM9 314 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 LCN9Q8WX39 176 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 ZG16BQ96DA0 208 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 LMAN2LQ9H0V9 348 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 SEMA4GQ9NTN9 838 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 CDH23Q9H251 3354 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 TMEM129A0AVI4 362 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 SNTNA6NMZ2 147 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 ZIC2O95409 532 aaPredicted RBP20.74■□□□□ 0.91
UPF3A-201ENST00000351487 NTSR1P30989 418 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 TNFSF8P32971 234 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 DEFA1P59665 94 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 DEFA3P59666 94 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 LTB4RQ15722 352 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 MINDY4Q4G0A6 757 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 LIPKQ5VXJ0 399 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 USP30Q70CQ3 517 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 C16orf62Q7Z3J2 963 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 KCT2Q8NC54 265 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 OR4E2Q8NGC2 313 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 ASB12Q8WXK4 309 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 SAP130Q9H0E3 1048 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 SLC6A17Q9H1V8 727 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 FBRSQ9HAH7 460 aa20.74■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3DA0A087WVF3 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3IA0A087WXS9 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3EA0A087X179 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3KA0A087X1G2 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 IQCMA0A1B0GVH7 501 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3FA6NER0 549 aaPredicted RBP20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TMEM221A6NGB7 291 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3LB9A6J9 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 WWP2O00308 870 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 SLC31A1O15431 190 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3HP0C7X1 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 MYL12AP19105 171 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 OMPP47874 163 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 WNT4P56705 351 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 PPP2CBP62714 309 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 PPP2CAP67775 309 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 RGS1Q08116 209 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3GQ6DHY5 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3CQ6IPX1 549 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 MTSS1LQ765P7 747 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 PRICKLE2Q7Z3G6 844 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 ASPGQ86U10 573 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TBC1D3Q8IZP1 549 aaPredicted RBP20.73■□□□□ 0.91
UPF3A-201ENST00000351487 KAT2AQ92830 837 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 WDFY2Q96P53 400 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 PRR14Q9BWN1 585 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 PRRG3Q9BZD7 231 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TRIM45Q9H8W5 580 aaPredicted RBP20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TICRRQ7Z2Z1 1910 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 SCN3AQ9NY46 2000 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 GSAPA4D1B5 854 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 SLC35F4A4IF30 521 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 DUXAA6NLW8 204 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 BTN3A3O00478 584 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 STK25O00506 426 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 FRS3O43559 492 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 EML2O95834 649 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 SPNP16150 400 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 IFNA8P32881 189 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 TNFRSF17Q02223 184 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 SYCE2Q6PIF2 218 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 ZNF730Q6ZMV8 503 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 MS4A4EQ96PG1 132 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 SLC38A2Q96QD8 506 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 ISYNA1Q9NPH2 558 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 KLHL28Q9NXS3 571 aa20.73■□□□□ 0.91
UPF3A-201ENST00000351487 CPSF4LA6NMK7 179 aaKnown RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 KDM4EB2RXH2 506 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 ZNF888P0CJ79 500 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 TRHRP34981 398 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 FAM214AQ32MH5 1076 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 FLYWCH1Q4VC44 716 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 ATAT1Q5SQI0 421 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 MFSD12Q6NUT3 480 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 FAM111BQ6SJ93 734 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 LRRC25Q8N386 305 aaPredicted RBP20.72■□□□□ 0.91
UPF3A-201ENST00000351487 PIGXQ8TBF5 258 aa20.72■□□□□ 0.91
UPF3A-201ENST00000351487 SLC35A4Q96G79 324 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms