RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 OVCA2Q8WZ82 227 aa16.79■□□□□ 0.28
APP-202ENST00000348990 SLC35G5Q96KT7 338 aa16.79■□□□□ 0.28
APP-202ENST00000348990 CACNG6Q9BXT2 260 aa16.79■□□□□ 0.28
APP-202ENST00000348990 RSPO3Q9BXY4 272 aaPredicted RBP16.79■□□□□ 0.28
APP-202ENST00000348990 RNF32Q9H0A6 362 aa16.79■□□□□ 0.28
APP-202ENST00000348990 DDX31Q9H8H2 851 aaKnown RBP16.79■□□□□ 0.28
APP-202ENST00000348990 MRPL15Q9P015 296 aaKnown RBP16.79■□□□□ 0.28
APP-202ENST00000348990 TNFRSF10DQ9UBN6 386 aa16.79■□□□□ 0.28
APP-202ENST00000348990 ASF1AQ9Y294 204 aa16.79■□□□□ 0.28
APP-202ENST00000348990 SHOXO15266 292 aa16.78■□□□□ 0.28
APP-202ENST00000348990 SHC1P29353 583 aa16.78■□□□□ 0.28
APP-202ENST00000348990 GPR4P46093 362 aa16.78■□□□□ 0.28
APP-202ENST00000348990 CCR6P51684 374 aa16.78■□□□□ 0.28
APP-202ENST00000348990 SLC3A1Q07837 685 aa16.78■□□□□ 0.28
APP-202ENST00000348990 NXPE4Q6UWF7 544 aa16.78■□□□□ 0.28
APP-202ENST00000348990 KIF18BQ86Y91 864 aa16.78■□□□□ 0.28
APP-202ENST00000348990 BBS1Q8NFJ9 593 aa16.78■□□□□ 0.28
APP-202ENST00000348990 OR5P2Q8WZ92 322 aa16.78■□□□□ 0.28
APP-202ENST00000348990 CASD1Q96PB1 797 aa16.78■□□□□ 0.28
APP-202ENST00000348990 RBCK1Q9BYM8 510 aa16.78■□□□□ 0.28
APP-202ENST00000348990 PHF11Q9UIL8 331 aa16.78■□□□□ 0.28
APP-202ENST00000348990 NUPL2O15504 423 aaKnown RBP16.78■□□□□ 0.28
APP-202ENST00000348990 EPHB3P54753 998 aa16.78■□□□□ 0.28
APP-202ENST00000348990 LASP1Q14847 261 aaKnown RBP16.78■□□□□ 0.28
APP-202ENST00000348990 ARSIQ5FYB1 569 aa16.78■□□□□ 0.28
APP-202ENST00000348990 OR11H7Q8NGC8 314 aa16.78■□□□□ 0.28
APP-202ENST00000348990 SORCS1Q8WY21 1168 aa16.78■□□□□ 0.28
APP-202ENST00000348990 UCN3Q969E3 161 aa16.78■□□□□ 0.28
APP-202ENST00000348990 RFKQ969G6 155 aa16.78■□□□□ 0.28
APP-202ENST00000348990 NEURL3Q96EH8 262 aa16.78■□□□□ 0.28
APP-202ENST00000348990 C1QTNF6Q9BXI9 259 aa16.78■□□□□ 0.28
APP-202ENST00000348990 OR2AG1Q9H205 316 aa16.78■□□□□ 0.28
APP-202ENST00000348990 FEZF1A0PJY2 475 aa16.78■□□□□ 0.28
APP-202ENST00000348990 PDE7AQ13946 482 aa16.78■□□□□ 0.28
APP-202ENST00000348990 NDUFA9Q16795 377 aa16.78■□□□□ 0.28
APP-202ENST00000348990 COMTD1Q86VU5 262 aa16.78■□□□□ 0.28
APP-202ENST00000348990 BBS4Q96RK4 519 aa16.78■□□□□ 0.28
APP-202ENST00000348990 NRTNQ99748 197 aa16.78■□□□□ 0.28
APP-202ENST00000348990 VWA8A3KMH1 1905 aa16.77■□□□□ 0.28
APP-202ENST00000348990 INPPL1O15357 1258 aa16.77■□□□□ 0.28
APP-202ENST00000348990 C1orf105O95561 183 aa16.77■□□□□ 0.28
APP-202ENST00000348990 EIF4EP06730 217 aaKnown RBP16.77■□□□□ 0.28
APP-202ENST00000348990 FGF9P31371 208 aaPredicted RBP16.77■□□□□ 0.28
APP-202ENST00000348990 SOX9P48436 509 aa16.77■□□□□ 0.28
APP-202ENST00000348990 EXOSC2Q13868 293 aaKnown RBP16.77■□□□□ 0.28
APP-202ENST00000348990 MINDY4Q4G0A6 757 aa16.77■□□□□ 0.28
APP-202ENST00000348990 LYPD4Q6UWN0 246 aa16.77■□□□□ 0.28
APP-202ENST00000348990 SLC43A3Q8NBI5 491 aa16.77■□□□□ 0.28
APP-202ENST00000348990 OR10H4Q8NGA5 316 aa16.77■□□□□ 0.28
APP-202ENST00000348990 OR2T35Q8NGX2 323 aa16.77■□□□□ 0.28
APP-202ENST00000348990 RIT1Q92963 219 aa16.77■□□□□ 0.28
APP-202ENST00000348990 TTTY10Q9BZA0 68 aa16.77■□□□□ 0.28
APP-202ENST00000348990 UBQLN2Q9UHD9 624 aa16.77■□□□□ 0.28
APP-202ENST00000348990 PLXNA3P51805 1871 aa16.77■□□□□ 0.28
APP-202ENST00000348990 TEX51A0A1B0GUA7 166 aa16.77■□□□□ 0.28
APP-202ENST00000348990 NEDD8-MDP1E9PL57 170 aa16.77■□□□□ 0.28
APP-202ENST00000348990 ADAMTS4O75173 837 aa16.77■□□□□ 0.28
APP-202ENST00000348990 SLC2A10O95528 541 aa16.77■□□□□ 0.28
APP-202ENST00000348990 HLA-FP30511 346 aa16.77■□□□□ 0.28
APP-202ENST00000348990 PITPNBP48739 271 aa16.77■□□□□ 0.28
APP-202ENST00000348990 CRYZQ08257 329 aaKnown RBP16.77■□□□□ 0.28
APP-202ENST00000348990 CDC73Q6P1J9 531 aa16.77■□□□□ 0.28
APP-202ENST00000348990 PRICKLE2Q7Z3G6 844 aa16.77■□□□□ 0.28
APP-202ENST00000348990 ADGRF3Q8IZF5 1079 aa16.77■□□□□ 0.28
APP-202ENST00000348990 KRT78Q8N1N4 520 aa16.77■□□□□ 0.28
APP-202ENST00000348990 BTBD1Q9H0C5 482 aa16.77■□□□□ 0.28
APP-202ENST00000348990 NT5DC2Q9H857 520 aa16.77■□□□□ 0.28
APP-202ENST00000348990 TDP1Q9NUW8 608 aa16.77■□□□□ 0.28
APP-202ENST00000348990 IFNGR2P38484 337 aa16.77■□□□□ 0.27
APP-202ENST00000348990 PNLIPRP1P54315 467 aa16.77■□□□□ 0.27
APP-202ENST00000348990 OR10A3P58181 314 aa16.77■□□□□ 0.27
APP-202ENST00000348990 HSF2Q03933 536 aa16.77■□□□□ 0.27
APP-202ENST00000348990 GALEQ14376 348 aa16.77■□□□□ 0.27
APP-202ENST00000348990 GLYATL1Q969I3 302 aa16.77■□□□□ 0.27
APP-202ENST00000348990 ISG20L2Q9H9L3 353 aaKnown RBP16.77■□□□□ 0.27
APP-202ENST00000348990 A0A087WUU8 490 aa16.76■□□□□ 0.27
APP-202ENST00000348990 TEX46H3BTG2 121 aa16.76■□□□□ 0.27
APP-202ENST00000348990 SGK494L7N484 410 aa16.76■□□□□ 0.27
APP-202ENST00000348990 FOXE1O00358 373 aaPredicted RBP16.76■□□□□ 0.27
APP-202ENST00000348990 LEFTY1O75610 366 aa16.76■□□□□ 0.27
APP-202ENST00000348990 UBXN7O94888 489 aa16.76■□□□□ 0.27
APP-202ENST00000348990 TP53P04637 393 aaPredicted RBP16.76■□□□□ 0.27
APP-202ENST00000348990 ELFN1P0C7U0 828 aa16.76■□□□□ 0.27
APP-202ENST00000348990 GSTM3P21266 225 aa16.76■□□□□ 0.27
APP-202ENST00000348990 SLC6A1P30531 599 aa16.76■□□□□ 0.27
APP-202ENST00000348990 TAGLNQ01995 201 aaKnown RBP16.76■□□□□ 0.27
APP-202ENST00000348990 TAP2Q03519 686 aa16.76■□□□□ 0.27
APP-202ENST00000348990 TRIM71Q2Q1W2 868 aaKnown RBP16.76■□□□□ 0.27
APP-202ENST00000348990 ZNF782Q6ZMW2 699 aaPredicted RBP16.76■□□□□ 0.27
APP-202ENST00000348990 PCSK9Q8NBP7 692 aaKnown RBP16.76■□□□□ 0.27
APP-202ENST00000348990 FBXO15Q8NCQ5 510 aaPredicted RBP16.76■□□□□ 0.27
APP-202ENST00000348990 OR8D4Q8NGM9 314 aa16.76■□□□□ 0.27
APP-202ENST00000348990 OR9A1PQ8NGU1 263 aa16.76■□□□□ 0.27
APP-202ENST00000348990 CYB5D2Q8WUJ1 264 aa16.76■□□□□ 0.27
APP-202ENST00000348990 TIFAQ96CG3 184 aa16.76■□□□□ 0.27
APP-202ENST00000348990 KCNN2Q9H2S1 579 aa16.76■□□□□ 0.27
APP-202ENST00000348990 ZNF334Q9HCZ1 680 aaPredicted RBP16.76■□□□□ 0.27
APP-202ENST00000348990 A4GALTQ9NPC4 353 aa16.76■□□□□ 0.27
APP-202ENST00000348990 SPG21Q9NZD8 308 aa16.76■□□□□ 0.27
APP-202ENST00000348990 SCN10AQ9Y5Y9 1956 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms