RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 SFXN5Q8TD22 340 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 DOK4Q8TEW6 326 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 GEMIN6Q8WXD5 167 aaKnown RBP8.65□□□□□ -1.02
ATG4A-202ENST00000345734 ELP4Q96EB1 424 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF300Q96RE9 604 aaPredicted RBP8.65□□□□□ -1.02
ATG4A-202ENST00000345734 EPYCQ99645 322 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 CCDC3Q9BQI4 270 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 TMPRSS13Q9BYE2 586 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 ROGDIQ9GZN7 287 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 EQTNQ9NQ60 294 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 PHF11Q9UIL8 331 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 SATB2Q9UPW6 733 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 SIT1Q9Y3P8 196 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 NAALAD2Q9Y3Q0 740 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 ZNF451Q9Y4E5 1061 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 SLC22A7Q9Y694 548 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 KCNE3Q9Y6H6 103 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 WDFY4Q6ZS81 3184 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 RP1P56715 2156 aa8.65□□□□□ -1.02
ATG4A-202ENST00000345734 LOC100130705A0A1B0GUX0 176 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 FAM227AF5H4B4 570 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 SGK494L7N484 410 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 AQP9O43315 295 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 DPM1O60762 260 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 MFN2O95140 757 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 PROS1P07225 676 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 FHP07954 510 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 NR2F1P10589 423 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 RPL5P46777 297 aaKnown RBP8.65□□□□□ -1.03
ATG4A-202ENST00000345734 KHKP50053 298 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 ARHGDIAP52565 204 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 CDH12P55289 794 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 SPIBQ01892 262 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 FUT5Q11128 374 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 NADK2Q4G0N4 442 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 TTC23Q5W5X9 447 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 TSSK4Q6SA08 328 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 WDR53Q7Z5U6 358 aaPredicted RBP8.65□□□□□ -1.03
ATG4A-202ENST00000345734 ARMC8Q8IUR7 673 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 MCATQ8IVS2 390 aaKnown RBP8.65□□□□□ -1.03
ATG4A-202ENST00000345734 SIMC1Q8NDZ2 872 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF555Q8NEP9 628 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 NUP43Q8NFH3 380 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 NRBF2Q96F24 287 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 COL21A1Q96P44 957 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 SLC38A3Q99624 504 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 MAP3K3Q99759 626 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 TREX2Q9BQ50 279 aaPredicted RBP8.65□□□□□ -1.03
ATG4A-202ENST00000345734 WFDC6Q9BQY6 131 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 THSD1Q9NS62 852 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 EXD2Q9NVH0 621 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 P2RX2Q9UBL9 471 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 MUTYHQ9UIF7 546 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 C3orf18Q9UK00 162 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 PSME2Q9UL46 239 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 LYVE1Q9Y5Y7 322 aa8.65□□□□□ -1.03
ATG4A-202ENST00000345734 SEC16AO15027 2179 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 TNFRSF11BO00300 401 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 EMC8O43402 210 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 B4GAT1O43505 415 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 GALR3O60755 368 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-202ENST00000345734 CHRM4P08173 479 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 IL7RP16871 459 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 EPHA2P29317 976 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 S100A5P33763 92 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 XCR1P46094 333 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 CAPZBP47756 277 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 RAD23AP54725 363 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 SHC2P98077 582 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 EPS8Q12929 822 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 SPCS2Q15005 226 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 KCTD21Q4G0X4 260 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF362Q5T0B9 420 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-202ENST00000345734 NKAIN2Q5VXU1 208 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 FAM111BQ6SJ93 734 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 THAP5Q7Z6K1 395 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 COMTD1Q86VU5 262 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 LRRC25Q8N386 305 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-202ENST00000345734 SVOPQ8N4V2 548 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 ESX1Q8N693 406 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF655Q8N720 491 aaPredicted RBP8.64□□□□□ -1.03
ATG4A-202ENST00000345734 ATG16L2Q8NAA4 619 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 PIK3C3Q8NEB9 887 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 OR7G2Q8NG99 324 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 OR4K14Q8NGD5 310 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 OR56A1Q8NGH5 318 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 OR4C15Q8NGM1 316 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 APOBEC4Q8WW27 367 aaKnown RBP8.64□□□□□ -1.03
ATG4A-202ENST00000345734 PPP1R14AQ96A00 147 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF347Q96SE7 839 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 SLC7A5P2Q9GIP4 190 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 TPK1Q9H3S4 243 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 KIF17Q9P2E2 1029 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 RHCGQ9UBD6 479 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 PCDHGB3Q9Y5G1 929 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 PCDHGA8Q9Y5G5 932 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 ORC6Q9Y5N6 252 aa8.64□□□□□ -1.03
ATG4A-202ENST00000345734 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.63□□□□□ -1.03
ATG4A-202ENST00000345734 LMO7DNF2Z398 122 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms