RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 WWP2O00308 870 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 CPMP14384 443 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 PORP16435 677 aaPredicted RBP12.77□□□□□ -0.37
TPM4-202ENST00000344824 NT5EP21589 574 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 CPOXP36551 454 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 SSR4P51571 173 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 IGLV3-21P80748 117 aaPredicted RBP12.77□□□□□ -0.37
TPM4-202ENST00000344824 GAB1Q13480 694 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 SPDYE7PQ495Y7 208 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 RPUSD3Q6P087 351 aaKnown RBP12.77□□□□□ -0.37
TPM4-202ENST00000344824 DLEU7Q6UYE1 221 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 DGAT2L6Q6ZPD8 337 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 CYP4Z2PQ8N1L4 340 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 FAM98AQ8NCA5 519 aaKnown RBP12.77□□□□□ -0.37
TPM4-202ENST00000344824 MDS2Q8NDY4 140 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 OR9A2Q8NGT5 310 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 TMEM125Q96AQ2 219 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 ROPN1LQ96C74 230 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 AURKBQ96GD4 344 aaPredicted RBP12.77□□□□□ -0.37
TPM4-202ENST00000344824 ZNF681Q96N22 645 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 GAL3ST4Q96RP7 486 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 CGREF1Q99674 301 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 CXorf36Q9H7Y0 433 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 ADA2Q9NZK5 511 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 VAPAQ9P0L0 249 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 ERVK-11Q9UQG0 969 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 ERVK-19Q9WJR5 959 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 PCDHB14Q9Y5E9 798 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 EXPH5Q8NEV8 1989 aa12.77□□□□□ -0.37
TPM4-202ENST00000344824 SETXQ7Z333 2677 aaKnown RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 A8MVJ9 347 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 FXYD1O00168 92 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 ERN1O75460 977 aaKnown RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 OR2J2O76002 312 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 DDAH2O95865 285 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 C1QCP02747 245 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 MPIP34949 423 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 FRKP42685 505 aaPredicted RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 TRPC1P48995 793 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 GPR143P51810 404 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 MTPNP58546 118 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 ZNF267Q14586 743 aaPredicted RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 DNAL1Q4LDG9 190 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 TMEM107Q6UX40 140 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 ANGPTL8Q6UXH0 198 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 HACD2Q6Y1H2 254 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 MSRB3Q8IXL7 192 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 SAMD14Q8IZD0 417 aaPredicted RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 ST13P4Q8IZP2 240 aaPredicted RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 PGAM4Q8N0Y7 254 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 FAM26EQ8N5C1 309 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 PNPT1Q8TCS8 783 aaKnown RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 ASB15Q8WXK1 588 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 KAT2AQ92830 837 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 ART5Q96L15 291 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 PELOQ9BRX2 385 aaKnown RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 THTPAQ9BU02 230 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 TSPAN10Q9H1Z9 355 aaPredicted RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 LRMDAQ9H2I8 198 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 ACSS1Q9NUB1 689 aaPredicted RBP12.76□□□□□ -0.37
TPM4-202ENST00000344824 HPF1Q9NWY4 346 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 NDE1Q9NXR1 346 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 TAS2R9Q9NYW1 312 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 SLC25A37Q9NYZ2 338 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 COL12A1Q99715 3063 aa12.76□□□□□ -0.37
TPM4-202ENST00000344824 ASH1LQ9NR48 2969 aaKnown RBP12.75□□□□□ -0.37
TPM4-202ENST00000344824 RNF103-CHMP3A0A140T963 221 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 HRKO00198 91 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 NEURL1O76050 574 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 CRYABP02511 175 aaKnown RBP12.75□□□□□ -0.37
TPM4-202ENST00000344824 SP1P08047 785 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 CHI3L1P36222 383 aaPredicted RBP12.75□□□□□ -0.37
TPM4-202ENST00000344824 HLCSP50747 726 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 SLC7A2P52569 658 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 CASP9P55211 416 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 LRRC74AQ0VAA2 488 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 SELPLGQ14242 412 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 RABL3Q5HYI8 236 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 LRIF1Q5T3J3 769 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 SLC25A25Q6KCM7 469 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 BNC2Q6ZN30 1099 aaPredicted RBP12.75□□□□□ -0.37
TPM4-202ENST00000344824 RNF111Q6ZNA4 994 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 ST6GALNAC3Q8NDV1 305 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 ZNF721Q8TF20 911 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 NR4A3Q92570 626 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 MCUR1Q96AQ8 359 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 CLPTM1LQ96KA5 538 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 SLC35A5Q9BS91 424 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 C1orf21Q9H246 121 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 ANKRA2Q9H9E1 313 aa12.75□□□□□ -0.37
TPM4-202ENST00000344824 PPIEQ9UNP9 301 aaKnown RBP12.75□□□□□ -0.37
TPM4-202ENST00000344824 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.75□□□□□ -0.37
TPM4-202ENST00000344824 GTF3C1Q12789 2109 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 DNAJC8O75937 253 aaPredicted RBP12.74□□□□□ -0.37
TPM4-202ENST00000344824 PDE5AO76074 875 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 EDN3P14138 238 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 PTPN6P29350 595 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 PGM1P36871 562 aa12.74□□□□□ -0.37
TPM4-202ENST00000344824 SOX3P41225 446 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms