RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 FAM32AQ9Y421 112 aaKnown RBP20.52■□□□□ 0.87
CACNB1-201ENST00000344140 HEMK1Q9Y5R4 338 aaPredicted RBP20.52■□□□□ 0.87
CACNB1-201ENST00000344140 IGLV3-12A0A075B6K2 115 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 TTC36A6NLP5 189 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 POLR1CO15160 346 aaPredicted RBP20.51■□□□□ 0.87
CACNB1-201ENST00000344140 DIRAS1O95057 198 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 NKX2-2O95096 273 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 HPRP00739 348 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 ALPPP05187 535 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 CCKBRP32239 447 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 EMDP50402 254 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 ALDH3A2P51648 485 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 PGDP52209 483 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 PDX1P52945 283 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 MED21Q13503 144 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 DAG1Q14118 895 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 COX15Q7KZN9 410 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 BMPERQ8N8U9 685 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 SLC38A9Q8NBW4 561 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 PHOX2BQ99453 314 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 CACYBPQ9HB71 228 aaKnown RBP20.51■□□□□ 0.87
CACNB1-201ENST00000344140 FOLH1BQ9HBA9 442 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 SLC22A11Q9NSA0 550 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 ERVK-19Q9WJR5 959 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 SAMHD1Q9Y3Z3 626 aaKnown RBP20.51■□□□□ 0.87
CACNB1-201ENST00000344140 WDR45Q9Y484 360 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 PCDHGA8Q9Y5G5 932 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 AP4B1Q9Y6B7 739 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 ENPP4Q9Y6X5 453 aa20.51■□□□□ 0.87
CACNB1-201ENST00000344140 TCRBV16S1A1N1A0A5B0 115 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 C17orf105B2RV13 164 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 DENRO43583 198 aaKnown RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 FPR1P21462 350 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 SSTR4P31391 388 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 OCA2Q04671 838 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 ILKQ13418 452 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 TBPL2Q6SJ96 375 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 TSEN54Q7Z6J9 526 aaKnown RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 MAGEE2Q8TD90 523 aaPredicted RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PMM1Q92871 262 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 TSLPQ969D9 159 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 SDF2Q99470 211 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 CDC6Q99741 560 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 RBM4BQ9BQ04 359 aaKnown RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 RBM4Q9BWF3 364 aaKnown RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PINK1Q9BXM7 581 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 APMAPQ9HDC9 416 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 FBXO8Q9NRD0 319 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PNO1Q9NRX1 252 aaKnown RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 RXFP3Q9NSD7 469 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 C14orf105Q9NVL8 296 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 AKAP7Q9P0M2 348 aaPredicted RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 CTSFQ9UBX1 484 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 MKL2Q9ULH7 1088 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 U3KQV3 271 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PRAMEF25A6NGN4 478 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 CBFA2T3O75081 653 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 STX11O75558 287 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 DNAJB5O75953 348 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 RHCEP18577 417 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 GABRA3P34903 492 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 POU6F2P78424 691 aaPredicted RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 MC2RQ01718 297 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PUM1Q14671 1186 aaKnown RBP eCLIP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 ELAVL1Q15717 326 aaKnown RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 NSDHLQ15738 373 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 CYP27C1Q4G0S4 372 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 DCST2Q5T1A1 773 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 FRRS1Q6ZNA5 592 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 OLIG3Q7RTU3 272 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 TMEM151BQ8IW70 566 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PLPP5Q8NEB5 264 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PTPMT1Q8WUK0 201 aaPredicted RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 VSTM2LQ96N03 204 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 EPYCQ99645 322 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 AMBRA1Q9C0C7 1298 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 VN1R1Q9GZP7 353 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 ZNF350Q9GZX5 532 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 POLE3Q9NRF9 147 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 SMPD3Q9NY59 655 aaPredicted RBP20.5■□□□□ 0.87
CACNB1-201ENST00000344140 VNN3Q9NY84 501 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 PRODH2Q9UF12 536 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 SLC9A8Q9Y2E8 581 aa20.5■□□□□ 0.87
CACNB1-201ENST00000344140 OTOGLQ3ZCN5 2332 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 HRKO00198 91 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 ALPLP05186 524 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 RPSAP08865 295 aaKnown RBP20.49■□□□□ 0.87
CACNB1-201ENST00000344140 PABPC4LP0CB38 370 aaKnown RBP20.49■□□□□ 0.87
CACNB1-201ENST00000344140 E2F1Q01094 437 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 TMEM179BQ7Z7N9 219 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 STT3BQ8TCJ2 826 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 FBXL20Q96IG2 436 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 PIP5K1AQ99755 562 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 OR10A5Q9H207 317 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 USE1Q9NZ43 259 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 IFT52Q9Y366 437 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 CLCA3PQ9Y6N3 262 aa20.49■□□□□ 0.87
CACNB1-201ENST00000344140 SYT5O00445 386 aa20.48■□□□□ 0.87
CACNB1-201ENST00000344140 FCMRO60667 390 aa20.48■□□□□ 0.87
CACNB1-201ENST00000344140 CPNE3O75131 537 aaKnown RBP20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms