RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 SRFBP1Q8NEF9 429 aaKnown RBP18.87■□□□□ 0.61
SPG7-202ENST00000341316 C10orf90Q96M02 699 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 CFL2Q9Y281 166 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 CHST2Q9Y4C5 530 aa18.87■□□□□ 0.61
SPG7-202ENST00000341316 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 A0A0G2JPF8 293 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 HNRNPCL2B2RXH8 293 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 HNRNPCL3B7ZW38 293 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 CCRL2O00421 344 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 HNRNPCL4P0DMR1 293 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 PIPP12273 146 aaPredicted RBP18.86■□□□□ 0.61
SPG7-202ENST00000341316 TSFMP43897 325 aaKnown RBP18.86■□□□□ 0.61
SPG7-202ENST00000341316 LSRQ86X29 649 aaPredicted RBP18.86■□□□□ 0.61
SPG7-202ENST00000341316 VRK2Q86Y07 508 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 SHISA5Q8N114 240 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 SIMC1Q8NDZ2 872 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 CAPSLQ8WWF8 208 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 KLHL6Q8WZ60 621 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 GIMAP5Q96F15 307 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 MRGPRX1Q96LB2 322 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 PRRC1Q96M27 445 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 SPATA5L1Q9BVQ7 753 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 SRMSQ9H3Y6 488 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 TMEM74BQ9NUR3 256 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 ERVK13-1Q9NX77 482 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 TTC36A6NLP5 189 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 LOC110117498-PIK3R3F6TDL0 507 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 GPX5O75715 221 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 SNX4O95219 450 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 CKMT1AP12532 417 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 ACTR1BP42025 376 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 ACTR1AP61163 376 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 PRR5P85299 388 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 IFITM2Q01629 132 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 TIMM50Q3ZCQ8 353 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 C1QTNF12Q5T7M4 302 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 CASP12Q6UXS9 341 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 IL17RDQ8NFM7 739 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 PIK3R3Q92569 461 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 CEP19Q96LK0 163 aa18.86■□□□□ 0.61
SPG7-202ENST00000341316 P2RX6O15547 441 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 PRKYO43930 277 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 CTSVO60911 334 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 APOA1P02647 267 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 HOXC4P09017 264 aaPredicted RBP18.85■□□□□ 0.61
SPG7-202ENST00000341316 NR2F6P10588 404 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 C6orf132Q5T0Z8 1188 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 ASPGQ86U10 573 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 NRROSQ86YC3 692 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 ZNF486Q96H40 463 aaPredicted RBP18.85■□□□□ 0.61
SPG7-202ENST00000341316 WDR92Q96MX6 357 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 PINK1Q9BXM7 581 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 SLC28A3Q9HAS3 691 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 TVP23BQ9NYZ1 205 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 ANXA11P50995 505 aaKnown RBP18.85■□□□□ 0.61
SPG7-202ENST00000341316 ZNF91Q05481 1191 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 ADAM15Q13444 863 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 PRRT3Q5FWE3 981 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 ZNF311Q5JNZ3 666 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 ACSM5Q6NUN0 579 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 FAM111BQ6SJ93 734 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 CD300LDQ6UXZ3 194 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 PSD4Q8NDX1 1056 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 CHAC2Q8WUX2 184 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 GAL3ST3Q96A11 431 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 MOAP1Q96BY2 351 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 OPALINQ96PE5 141 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 OR2A14Q96R47 310 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 SLC30A2Q9BRI3 323 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 YIPF2Q9BWQ6 316 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 TAPBPLQ9BX59 468 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 LSM2Q9Y333 95 aaKnown RBP18.85■□□□□ 0.61
SPG7-202ENST00000341316 ZNF780BQ9Y6R6 833 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 SCN3AQ9NY46 2000 aa18.85■□□□□ 0.61
SPG7-202ENST00000341316 KNL1Q8NG31 2342 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 A6NCN8 305 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 CASC3O15234 703 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 FCMRO60667 390 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 RASGRP1O95267 797 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 RPS15AP62244 130 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 ALDH6A1Q02252 535 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 GNA13Q14344 377 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 RSBN1Q5VWQ0 802 aaPredicted RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 C1orf94Q6P1W5 598 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 KIF18BQ86Y91 864 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 OR7G2Q8NG99 324 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 OR8J1Q8NGP2 316 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 ZCCHC10Q8TBK6 192 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 ASB12Q8WXK4 309 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 CNPPD1Q9BV87 410 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 PLA2G12AQ9BZM1 189 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 EXOSC4Q9NPD3 245 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 GIMAP4Q9NUV9 329 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 LYARQ9NX58 379 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 KCMF1Q9P0J7 381 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 PCOLCE2Q9UKZ9 415 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 A0A087WUU8 490 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 CCNKO75909 580 aa18.84■□□□□ 0.61
SPG7-202ENST00000341316 TCEA1P23193 301 aaKnown RBP18.84■□□□□ 0.61
SPG7-202ENST00000341316 HOXC5Q00444 222 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms