RNA–Protein interactions for RNA: ENST00000341247.8

LIMA1-201, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMA1, Length 3,706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-201ENST00000341247 METTL15A6NJ78 407 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 CTDSP2O14595 271 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 MRPS14O60783 128 aaKnown RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 CSO75390 466 aaKnown RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 TP53P04637 393 aaPredicted RBP9.7□□□□□ -0.86
LIMA1-201ENST00000341247 CCNYL3P0C7X3 344 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 GIPRP48546 466 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 TPMTP51580 245 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 NFATC4Q14934 902 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 OR2G6Q5TZ20 316 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 ZNF438Q7Z4V0 828 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 PAQR7Q86WK9 346 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 KIF18BQ86Y91 864 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 AMER2Q8N7J2 671 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 OR56A1Q8NGH5 318 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 TOR4AQ9NXH8 423 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 OR6C2Q9NZP2 312 aa9.7□□□□□ -0.86
LIMA1-201ENST00000341247 PIP5K1CO60331 668 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 MPZL2O60487 215 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 GKN3PP0CG01 181 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 UGT2B7P16662 529 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 CD40LGP29965 261 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 S100A5P33763 92 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 IRF3Q14653 427 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SLC30A6Q6NXT4 461 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 FAM92BQ6ZTR7 304 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 PLEKHM3Q6ZWE6 761 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 UTS2BQ765I0 119 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 ZNF367Q7RTV3 350 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 ZNF614Q8N883 585 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SRFBP1Q8NEF9 429 aaKnown RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 PRRC1Q96M27 445 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 ZNF681Q96N22 645 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 OPALINQ96PE5 141 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 GABRG3Q99928 467 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 BCL7BQ9BQE9 202 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 PALMDQ9NP74 551 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 FBXO8Q9NRD0 319 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 CLCA2Q9UQC9 943 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 YARS2Q9Y2Z4 477 aaKnown RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 A0A1W2PRQ8 180 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 A8MVJ9 347 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 CCRL2O00421 344 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 MYL12BO14950 172 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 OXSR1O95747 527 aaPredicted RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 FUT1P19526 365 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 PCYT1AP49585 367 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 MAN2A2P49641 1150 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SMIM11AP58511 58 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 MLC1Q15049 377 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SPHARQ15513 63 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 ALG11Q2TAA5 492 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 INAVAQ3KP66 663 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 FIGLAQ6QHK4 219 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 Q6ZSR6 202 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 DEFB119Q8N690 84 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 KBTBD8Q8NFY9 601 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 OR8J1Q8NGP2 316 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 OR52P1PQ8NH57 321 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 PIK3R3Q92569 461 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 TRMT61AQ96FX7 289 aaKnown RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 CRELD1Q96HD1 420 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 TMEM80Q96HE8 168 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SPATA5L1Q9BVQ7 753 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 NUAK2Q9H093 628 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 POLMQ9NP87 494 aaPredicted RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SNTG1Q9NSN8 517 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 FBXO34Q9NWN3 711 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 NDRG2Q9UN36 371 aaKnown RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 CHST2Q9Y4C5 530 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 PCDHGA3Q9Y5H0 932 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SH3D21A4FU49 640 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 PRR19A6NJB7 356 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 H3BQ06 376 aaPredicted RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 CTSBP07858 339 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 HBQ1P09105 142 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 LSSP48449 732 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SRP54P61011 504 aaKnown RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 RELAQ04206 551 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 OXA1LQ15070 435 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 USP30Q70CQ3 517 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 GALNT12Q8IXK2 581 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 POC5Q8NA72 575 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 MORN4Q8NDC4 146 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 NACC2Q96BF6 587 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 OR2A14Q96R47 310 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 CDCA3Q99618 268 aaPredicted RBP9.69□□□□□ -0.86
LIMA1-201ENST00000341247 SLC25A19Q9HC21 320 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 HHATLQ9HCP6 504 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 C14orf119Q9NWQ9 140 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 ACAD8Q9UKU7 415 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 HEBP2Q9Y5Z4 205 aa9.69□□□□□ -0.86
LIMA1-201ENST00000341247 A0A0G2JPF8 293 aa9.68□□□□□ -0.86
LIMA1-201ENST00000341247 HNRNPCL2B2RXH8 293 aa9.68□□□□□ -0.86
LIMA1-201ENST00000341247 HNRNPCL3B7ZW38 293 aa9.68□□□□□ -0.86
LIMA1-201ENST00000341247 HCRTR1O43613 425 aa9.68□□□□□ -0.86
LIMA1-201ENST00000341247 HNRNPCL4P0DMR1 293 aa9.68□□□□□ -0.86
LIMA1-201ENST00000341247 GNSP15586 552 aa9.68□□□□□ -0.86
LIMA1-201ENST00000341247 ANXA11P50995 505 aaKnown RBP9.68□□□□□ -0.86
LIMA1-201ENST00000341247 EXOSC7Q15024 291 aaKnown RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms