RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SIRPAP78324 504 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 GPNMBQ14956 572 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 KLHL22Q53GT1 634 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 RABL3Q5HYI8 236 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 SLC35F1Q5T1Q4 408 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 VASH1Q7L8A9 365 aaPredicted RBP12.07□□□□□ -0.48
LIN54-201ENST00000340417 TP53I13Q8NBR0 393 aaPredicted RBP12.07□□□□□ -0.48
LIN54-201ENST00000340417 CLCC1Q96S66 551 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 PCDHAC1Q9H158 963 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 CHST8Q9H2A9 424 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 DYNLRB1Q9NP97 96 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 PDP2Q9P2J9 529 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 LAMP5Q9UJQ1 280 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 A0A1B0GVI7 797 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 HTR3AP46098 478 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 CSNK1G2P78368 415 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 PMS2CLQ68D20 193 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 CDS1Q92903 461 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 NUDT22Q9BRQ3 303 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 ICKQ9UPZ9 632 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 DNAJC15Q9Y5T4 150 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 FAM166BA8MTA8 275 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 SDHDO14521 159 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 PGRMC2O15173 223 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 OR2T5Q6IEZ7 315 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 ZNF611Q8N823 705 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 OR2T29Q8NH02 315 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 OR51A7Q8NH64 312 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 STT3BQ8TCJ2 826 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 NSMAFQ92636 917 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 OSTF1Q92882 214 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 ERMAPQ96PL5 475 aaPredicted RBP12.07□□□□□ -0.48
LIN54-201ENST00000340417 NUAK2Q9H093 628 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 UBQLN4Q9NRR5 601 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 ADAM29Q9UKF5 820 aa12.07□□□□□ -0.48
LIN54-201ENST00000340417 NPIPA5A0A0B4J1W7 369 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 hCG_1807616A0A1W2PRN6 198 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 NPIPA7E9PJI5 369 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 NPIPA8P0DM63 369 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 GCH1P30793 250 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 APLNRP35414 380 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 NLRP8Q86W28 1048 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 CPNE2Q96FN4 548 aaPredicted RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 TMEM19Q96HH6 336 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 WDR83Q9BRX9 315 aaKnown RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 COPS4Q9BT78 406 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 SATB2Q9UPW6 733 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 KLF13Q9Y2Y9 288 aaPredicted RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 PCDHGB1Q9Y5G3 927 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 LTBP1Q14766 1721 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 OR7A5Q15622 319 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 CES4AQ5XG92 561 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 OR6N2Q8NGY6 317 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 DPH2Q9BQC3 489 aaPredicted RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 OR10A5Q9H207 317 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 LIN28AQ9H9Z2 209 aaKnown RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 CMTM6Q9NX76 183 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 SLC5A10A0PJK1 596 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 ANXA2P2A6NMY6 339 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 DPM1O60762 260 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 CTNSO60931 367 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 DIRAS1O95057 198 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 ATE1O95260 518 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 ETFAP13804 333 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 ENTPD1P49961 510 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 NPRL3Q12980 569 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 MYBPHQ13203 477 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 BICRALQ6AI39 1079 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 LRTOMTQ8WZ04 291 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 PIK3R3Q92569 461 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 TCF7L1Q9HCS4 588 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 UNC119BA6NIH7 251 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 CSTBP04080 98 aaKnown RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 IVDP26440 423 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 IL10RAQ13651 578 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 TMEM53Q6P2H8 277 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 BAHD1Q8TBE0 780 aaPredicted RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 SPRYD4Q8WW59 207 aaPredicted RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 TMBIM1Q969X1 311 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 FKBP10Q96AY3 582 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 BTBD2Q9BX70 525 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 ENKD1Q9H0I2 346 aa12.06□□□□□ -0.48
LIN54-201ENST00000340417 TEX10Q9NXF1 929 aaPredicted RBP12.06□□□□□ -0.48
LIN54-201ENST00000340417 TAF4O00268 1085 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 RPS17P08708 135 aaKnown RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 NKD1Q969G9 470 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 C8orf44Q96CB5 159 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 OR4K3Q96R72 315 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 TAS2R10Q9NYW0 307 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 EBF1Q9UH73 591 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 A0A1B0GTQ1 180 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 TRAP1Q12931 704 aaKnown RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 CCSMST1Q4G0I0 132 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 SLC35F3Q8IY50 421 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 OR52N2Q8NGI0 321 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 SLC24A3Q9HC58 644 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 MKS1Q9NXB0 559 aa12.05□□□□□ -0.48
LIN54-201ENST00000340417 PTBP2Q9UKA9 531 aaKnown RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.05□□□□□ -0.48
LIN54-201ENST00000340417 KRBA1A5PL33 1030 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms