RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 PNLDC1Q8NA58 520 aaKnown RBP8.26□□□□□ -1.09
RTN3-202ENST00000339997 PLA2G15Q8NCC3 412 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 OR4F15Q8NGB8 312 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 POC1BQ8TC44 478 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 CREB3L1Q96BA8 519 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 AGAP4Q96P64 663 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 RAD9AQ99638 391 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 RGCCQ9H4X1 137 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 THSD1Q9NS62 852 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 GPN3Q9UHW5 284 aaPredicted RBP8.26□□□□□ -1.09
RTN3-202ENST00000339997 OR1A2Q9Y585 309 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 MRC1P22897 1456 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 SEC16AO15027 2179 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 C6P13671 934 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 UQCRC2P22695 453 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 SLC6A6P31641 620 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 PIK3CBP42338 1070 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 FKBP1BP68106 108 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 DEFB115Q30KQ5 88 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 SPRYD7Q5W111 196 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 MAMDC4Q6UXC1 1216 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 MFSD6LQ8IWD5 586 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 FAM86B1Q8N7N1 296 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 CHST14Q8NCH0 376 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 ANKK1Q8NFD2 765 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 SLC35B4Q969S0 331 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 ARHGAP39Q9C0H5 1083 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 PCBD2Q9H0N5 130 aa8.26□□□□□ -1.09
RTN3-202ENST00000339997 QRSL1Q9H0R6 528 aaKnown RBP8.26□□□□□ -1.09
RTN3-202ENST00000339997 A0A1W2PPL8 197 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 NPIPA5E9PKD4 350 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SLC22A5O76082 557 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 HPRP00739 348 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ZNF26P17031 533 aaPredicted RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 RHCEP18577 417 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SDC1P18827 310 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 RBMXP38159 391 aaKnown RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 GPR17Q13304 367 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 RGNQ15493 299 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 GRHL2Q6ISB3 625 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 BRAT1Q6PJG6 821 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 RNF111Q6ZNA4 994 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 UMODL1-AS1Q8N2C9 162 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 TMEM185AQ8NFB2 350 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ZNF514Q96K75 400 aaPredicted RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 C16orf70Q9BSU1 422 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SMIM3Q9BZL3 60 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SLC28A3Q9HAS3 691 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 IL26Q9NPH9 171 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ACOT13Q9NPJ3 140 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 KLRF1Q9NZS2 232 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 NPIPA1Q9UND3 350 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 CEP250Q9BV73 2442 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 A0A0G2JMP0 313 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 CENPBD1B2RD01 187 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 NFKBIEO00221 500 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 EOMESO95936 686 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 PAHP00439 452 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 NDUFV2P19404 249 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ACRV1P26436 265 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 GDI1P31150 447 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 PIGAP37287 484 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 UPP1Q16831 310 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 AAK1Q2M2I8 961 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 MEDAGQ5VYS4 303 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 PGM2L1Q6PCE3 622 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SYT14Q8NB59 555 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 OR4M2Q8NGB6 313 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 RHOXF1Q8NHV9 184 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 CD200R1Q8TD46 325 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ARSGQ96EG1 525 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 C1orf74Q96LT6 269 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SLC2A13Q96QE2 648 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ELF4Q99607 663 aaPredicted RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 PRR14Q9BWN1 585 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ZDHHC7Q9NXF8 308 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 COPS3Q9UNS2 423 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 OARD1Q9Y530 152 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ANKRD36CQ5JPF3 1778 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 FAAHO00519 579 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 PTGESO14684 152 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 JUPP14923 745 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 GNRHRP30968 328 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 HSD17B2P37059 387 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ETV5P41161 510 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SCGB2A2Q13296 93 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 CRHR2Q13324 411 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 DYRK1AQ13627 763 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 RIN1Q13671 783 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 PCGF3Q3KNV8 242 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 C18orf63Q68DL7 685 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.25□□□□□ -1.09
RTN3-202ENST00000339997 DCAF4L2Q8NA75 395 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 ZNF461Q8TAF7 563 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 GNPDA2Q8TDQ7 276 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 SMARCD2Q92925 531 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 NT5C3BQ969T7 300 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 MMABQ96EY8 250 aaPredicted RBP8.25□□□□□ -1.09
RTN3-202ENST00000339997 TEX37Q96LM6 180 aa8.25□□□□□ -1.09
RTN3-202ENST00000339997 FYTTD1Q96QD9 318 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms