RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 RPL36Q9Y3U8 105 aaKnown RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 A3GALT2U3KPV4 340 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 ISM1B1AKI9 464 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 HBQ1P09105 142 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 SPNP16150 400 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 HNRNPA2B1P22626 353 aaKnown RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 RHAGQ02094 409 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 PRKCDQ05655 676 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 RPE65Q16518 533 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 SPEM1Q8N4L4 309 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 OR2L5Q8NG80 312 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 OR9A2Q8NGT5 310 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 KAT2AQ92830 837 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 CLDN23Q96B33 292 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 TRNT1Q96Q11 434 aaKnown RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 PLA2G12AQ9BZM1 189 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 POLR2J2Q9GZM3 115 aaKnown RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 RERGLQ9H628 205 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 ZSCAN32Q9NX65 697 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 GIN1Q9NXP7 522 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 WSB2Q9NYS7 404 aaPredicted RBP15.31■□□□□ 0.04
LITAF-201ENST00000339430 SIT1Q9Y3P8 196 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 PEX16Q9Y5Y5 336 aa15.31■□□□□ 0.04
LITAF-201ENST00000339430 SAGE2PA6NJ88 616 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 CACNB4O00305 520 aaPredicted RBP15.3■□□□□ 0.04
LITAF-201ENST00000339430 AQP9O43315 295 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 PRICKLE3O43900 615 aaPredicted RBP15.3■□□□□ 0.04
LITAF-201ENST00000339430 MED26O95402 600 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 IGHV4-34P06331 123 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 PCYT1AP49585 367 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 ZNF45Q02386 682 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 NCF4Q15080 339 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 LTB4RQ15722 352 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 MEDAGQ5VYS4 303 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 VRK2Q86Y07 508 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 MORN4Q8NDC4 146 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 LRR1Q96L50 414 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 ASPNQ9BXN1 380 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 CFL2Q9Y281 166 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 CARD8Q9Y2G2 431 aa15.3■□□□□ 0.04
LITAF-201ENST00000339430 GPR55Q9Y2T6 319 aaPredicted RBP15.3■□□□□ 0.04
LITAF-201ENST00000339430 TRBV23OR9-2A0A075B6M9 112 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 PNMA8CA0A1B0GUJ8 204 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SLITRK5O94991 958 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 RPS19P39019 145 aaKnown RBP15.29■□□□□ 0.04
LITAF-201ENST00000339430 TGM4P49221 684 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 MAN2A2P49641 1150 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SNRPNP63162 240 aaKnown RBP15.29■□□□□ 0.04
LITAF-201ENST00000339430 HOXC5Q00444 222 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 CHRNEQ04844 493 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 LIPKQ5VXJ0 399 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 MRM1Q6IN84 353 aaKnown RBP15.29■□□□□ 0.04
LITAF-201ENST00000339430 KIF18BQ86Y91 864 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 OR4E2Q8NGC2 313 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 BMFQ96LC9 184 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 PRRC1Q96M27 445 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 OR7D2Q96RA2 312 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SPATA5L1Q9BVQ7 753 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 MND1Q9BWT6 205 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 RAB11FIP5Q9BXF6 653 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SLC17A4Q9Y2C5 497 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 GPR52Q9Y2T5 361 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 PCDHGB6Q9Y5F9 930 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 ISPDA4D126 451 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 CPSF4LA6NMK7 179 aaKnown RBP15.29■□□□□ 0.04
LITAF-201ENST00000339430 MYL12BO14950 172 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 ZNF217O75362 1048 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 APBB3O95704 486 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 EML2O95834 649 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 FHP07954 510 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 GIPRP48546 466 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 TAS2R41P59536 307 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 MAP4K2Q12851 820 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SNAPC1Q16533 368 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SYT14P1Q58G82 188 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 ZNF311Q5JNZ3 666 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SPANXN2Q5MJ10 180 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 KIAA0895LQ68EN5 471 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 SLC48A1Q6P1K1 146 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 NANOGP1Q8N7R0 232 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 KCT2Q8NC54 265 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 NUP43Q8NFH3 380 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 NECAB3Q96P71 396 aaPredicted RBP15.29■□□□□ 0.04
LITAF-201ENST00000339430 KLHL25Q9H0H3 589 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 FGF22Q9HCT0 170 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 BCL2L10Q9HD36 194 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 ERVK13-1Q9NX77 482 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 CES1P1Q9UKY3 287 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 PCDHGA4Q9Y5G9 962 aa15.29■□□□□ 0.04
LITAF-201ENST00000339430 RGS5O15539 181 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 F3P13726 295 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 CSNK2A2P19784 350 aaPredicted RBP15.28■□□□□ 0.04
LITAF-201ENST00000339430 BTN3A2P78410 334 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 MXD1Q05195 221 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 OCLNQ16625 522 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 BHLHB9Q6PI77 547 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 TMEM64Q6YI46 380 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 RD3Q7Z3Z2 195 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 PSD4Q8NDX1 1056 aa15.28■□□□□ 0.04
LITAF-201ENST00000339430 OR52I1Q8NGK6 324 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms