RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 GAB3Q8WWW8 586 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 HDAC2Q92769 488 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 CTHRC1Q96CG8 243 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 PINK1Q9BXM7 581 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 ALOXE3Q9BYJ1 711 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 YTHDF1Q9BYJ9 559 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 PRTFDC1Q9NRG1 225 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 CALML5Q9NZT1 146 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 DHCR7Q9UBM7 475 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 NDOR1Q9UHB4 597 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 WDR45Q9Y484 360 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 SMIM31A0A1B0GVY4 71 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 XPNPEP2O43895 674 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 BMP10O95393 424 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 CBX7O95931 251 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 FOLR1P15328 257 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 FMO3P31513 532 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 OR1D4P47884 311 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 HLCSP50747 726 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 DUSP8Q13202 625 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 GRM7Q14831 915 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 HLA-BQ31612 363 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 GARNL3Q5VVW2 1013 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 LAIR1Q6GTX8 287 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 OR2I1PQ8NGU4 316 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 OR52P1PQ8NH57 321 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 ZNF675Q8TD23 568 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 GPR151Q8TDV0 419 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 RBM18Q96H35 190 aaKnown RBP20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 SDF2Q99470 211 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 YIPF2Q9BWQ6 316 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 GABARAPL3Q9BY60 117 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 PIGUQ9H490 435 aa20.92■□□□□ 0.94
PDLIM2-203ENST00000339162 CPED1A4D0V7 1026 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 H3BSA7 217 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 CFIP05156 583 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 ALOX5P09917 674 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 GPR3P46089 330 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 ALDH3B2P48448 385 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 CNPY1Q3B7I2 92 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 ARHGAP11BQ3KRB8 267 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 FIGNL1Q6PIW4 674 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 OR6C4Q8NGE1 309 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 SLC7A13Q8TCU3 470 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 ZNF556Q9HAH1 456 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 CXorf21Q9HAI6 301 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 SLC24A3Q9HC58 644 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 ATXN7L1Q9ULK2 861 aaPredicted RBP20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 TMCC3Q9ULS5 477 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 MRPS33Q9Y291 106 aaKnown RBP20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 CLDN16Q9Y5I7 305 aa20.91■□□□□ 0.94
PDLIM2-203ENST00000339162 NPIPA5A0A0B4J1W7 369 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 TRIM64CA6NLI5 447 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 PTGES3LE9PB15 166 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 NPIPA7E9PJI5 369 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 H3BMH7 237 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 CTNSO60931 367 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 UGT2B17O75795 530 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 NPIPA8P0DM63 369 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 CBLP22681 906 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 LSM11P83369 360 aaKnown RBP eCLIP20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 SMN1Q16637 294 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 DCST1Q5T197 706 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 ZNF770Q6IQ21 691 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 C1orf210Q8IVY1 113 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 GALNT12Q8IXK2 581 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 COX18Q8N8Q8 333 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 CDRT4Q8N9R6 151 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 SETD9Q8NE22 299 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 OR1L3Q8NH93 324 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 RIT1Q92963 219 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 CUTCQ9NTM9 273 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 TUBA8Q9NY65 449 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 ACAD8Q9UKU7 415 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 POFUT2Q9Y2G5 429 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 PCDHGA6Q9Y5G7 932 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 GXYLT2A0PJZ3 443 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 FITM1A5D6W6 292 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 SLC1A7O00341 560 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 HYAL3O43820 417 aaPredicted RBP20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 OR10H3O60404 316 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 AGR2O95994 175 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 SSTR4P31391 388 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 GABRA3P34903 492 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 RFX3P48380 749 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 GPLD1P80108 840 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 RBM48Q5RL73 367 aaKnown RBP20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 DCST2Q5T1A1 773 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 TMPRSS9Q7Z410 1059 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 APOL4Q9BPW4 351 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 FNDC11Q9BVV2 318 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 CHRNA10Q9GZZ6 450 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 NLGN3Q9NZ94 848 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 SLC13A4Q9UKG4 626 aa20.9■□□□□ 0.94
PDLIM2-203ENST00000339162 A0A1B0GTQ1 180 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 PATE3B3GLJ2 98 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 CLDN4O14493 209 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 S1PR1P21453 382 aa20.89■□□□□ 0.94
PDLIM2-203ENST00000339162 ZNF155Q12901 538 aaPredicted RBP20.89■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms