RNA–Protein interactions for RNA: ENST00000332840.9

SYN3-201, Transcript of synapsin III, humanhuman

TSL 5 BASIC

Gene SYN3, Length 972 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-201ENST00000332840 SOX11P35716 441 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 VHLP40337 213 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 FRKP42685 505 aaPredicted RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 PTDSS1P48651 473 aaKnown RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 GZMMP51124 257 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 MANFP55145 182 aaKnown RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 MLLT10P55197 1068 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 HSD17B7P56937 341 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 SESN3P58005 492 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 HBA1P69905 142 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 ARG2P78540 354 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 Q0VFX4 171 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 MLC1Q15049 377 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 INPP5JQ15735 1006 aaPredicted RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 MPEG1Q2M385 716 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 BTBD16Q32M84 506 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 SFT2D3Q587I9 215 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 ERICH5Q6P6B1 374 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 PAPD4Q6PIY7 484 aaKnown RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 LRRC74BQ6ZQY2 392 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 SERPINA11Q86U17 422 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 SPPL2CQ8IUH8 684 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 TMEM151BQ8IW70 566 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 ZNF595Q8IYB9 648 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 PQLC1Q8N2U9 271 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 OR5T3Q8NGG3 340 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 OR52E4Q8NGH9 312 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 ZFP28Q8NHY6 868 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 SUN3Q8TAQ9 357 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 M1APQ8TC57 530 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 BRIX1Q8TDN6 353 aaKnown RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 CIDECQ96AQ7 238 aaPredicted RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 KCTD12Q96CX2 325 aaKnown RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 ZBED6CLQ96FA7 236 aaPredicted RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 REXO5Q96IC2 774 aaKnown RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 ZNF354BQ96LW1 612 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 PTCHD1Q96NR3 888 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 GORASP2Q9H8Y8 452 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 LYRM4Q9HD34 91 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 MMP25Q9NPA2 562 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 AGPAT4Q9NRZ5 378 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 ACSS1Q9NUB1 689 aaPredicted RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 MS4A12Q9NXJ0 267 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 C6orf203Q9P0P8 240 aaPredicted RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 PTGFRNQ9P2B2 879 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 PHF11Q9UIL8 331 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 PSME2Q9UL46 239 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 AP4S1Q9Y587 144 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 SCN3AQ9NY46 2000 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 CCDC88CQ9P219 2028 aa9.07□□□□□ -0.96
SYN3-201ENST00000332840 SPENQ96T58 3664 aaKnown RBP9.07□□□□□ -0.96
SYN3-201ENST00000332840 SEC16AO15027 2179 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 TRAV17A0A0B4J275 112 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 A0A1W2PR48 441 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 DHRS12A0PJE2 317 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 CXCR6O00574 342 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 PROM1O43490 865 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 B4GALT2O60909 372 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 NCK1P16333 377 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 CPN2P22792 545 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 PSMA4P25789 261 aaKnown RBP9.06□□□□□ -0.96
SYN3-201ENST00000332840 NTSP30990 170 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 TLX1P31314 330 aaPredicted RBP9.06□□□□□ -0.96
SYN3-201ENST00000332840 BUD31P41223 144 aaPredicted RBP9.06□□□□□ -0.96
SYN3-201ENST00000332840 RAB38P57729 211 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 SNRPNP63162 240 aaKnown RBP9.06□□□□□ -0.96
SYN3-201ENST00000332840 OLR1P78380 273 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 ZNF169Q14929 603 aaPredicted RBP9.06□□□□□ -0.96
SYN3-201ENST00000332840 CYP51A1Q16850 503 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 PRSS53Q2L4Q9 553 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 LINC00696Q6ZRV3 163 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 LANCL3Q6ZV70 420 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 MMP21Q8N119 569 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 CA13Q8N1Q1 262 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 HORMAD2Q8N7B1 307 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 Q8NA96 180 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 PSMF1Q92530 271 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 HAS2Q92819 552 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 EXOSC8Q96B26 276 aaKnown RBP9.06□□□□□ -0.96
SYN3-201ENST00000332840 BBS4Q96RK4 519 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 MAPKAP1Q9BPZ7 522 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 SLC35A5Q9BS91 424 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 RBCK1Q9BYM8 510 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 VCX3BQ9H321 246 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 NEUROD4Q9HD90 331 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 SLC35C2Q9NQQ7 365 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 CCM2LQ9NUG4 571 aaPredicted RBP9.06□□□□□ -0.96
SYN3-201ENST00000332840 GIMAP4Q9NUV9 329 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 ARMC1Q9NVT9 282 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 UTS2RQ9UKP6 389 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 DAPP1Q9UN19 280 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 USP22Q9UPT9 525 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 ERVK-11Q9UQG0 969 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 ATG4BQ9Y4P1 393 aa9.06□□□□□ -0.96
SYN3-201ENST00000332840 DOPEY1Q5JWR5 2465 aa9.05□□□□□ -0.96
SYN3-201ENST00000332840 IGKV3D-11A0A0A0MRZ8 115 aa9.05□□□□□ -0.96
SYN3-201ENST00000332840 TCRBV5S2A0A599 114 aa9.05□□□□□ -0.96
SYN3-201ENST00000332840 TCRBV16S1A1N1A0A5B0 115 aa9.05□□□□□ -0.96
SYN3-201ENST00000332840 SAGE2PA6NJ88 616 aa9.05□□□□□ -0.96
SYN3-201ENST00000332840 MASP2O00187 686 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms