RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 SLC17A9Q9BYT1 436 aa10.05□□□□□ -0.8
CLN8-201ENST00000331222 ANKRD10Q9NXR5 420 aa10.05□□□□□ -0.8
CLN8-201ENST00000331222 A6NIN4 97 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 EMC8O43402 210 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 TUSC2O75896 110 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 STSP08842 583 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 DRD5P21918 477 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 TGM1P22735 817 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 CAMLGP49069 296 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 PLEKHS1Q5SXH7 462 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SFRP5Q5T4F7 317 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 NANOGP8Q6NSW7 305 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SLC27A4Q6P1M0 643 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 ARHGAP12Q8IWW6 846 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 GTF2H4Q92759 462 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 NANOGQ9H9S0 305 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 ACTR10Q9NZ32 417 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 CA5BQ9Y2D0 317 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 PITX1P78337 314 aaPredicted RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 FGL2Q14314 439 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SFT2D3Q587I9 215 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 OR2A12Q8NGT7 310 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 OR51Q1Q8NH59 317 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SGTBQ96EQ0 304 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SERINC2Q96SA4 455 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 URM1Q9BTM9 101 aaKnown RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 TPPP3Q9BW30 176 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 ULBP3Q9BZM4 244 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 ADAMTS10Q9H324 1103 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 C17orf105B2RV13 164 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 H2AFB2P0C5Z0 115 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 RPS2P15880 293 aaKnown RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 C9orf43Q8TAL5 461 aaPredicted RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 PIGCQ92535 297 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 COG8Q96MW5 612 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 DPH1Q9BZG8 443 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SLC7A8Q9UHI5 535 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SLC7A7Q9UM01 511 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 TEX264Q9Y6I9 313 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 PRRC2BQ5JSZ5 2229 aaKnown RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 M0R233 179 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SNHG28P0DPA3 235 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SOX9P48436 509 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 GRM7Q14831 915 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 RAB11BQ15907 218 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 LIPJQ5W064 366 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 ENPP6Q6UWR7 440 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 GPR155Q7Z3F1 870 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 TMEFF1Q8IYR6 380 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 IQCKQ8N0W5 287 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 OR5AR1Q8NGP9 310 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SLAMF9Q96A28 289 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 ARRDC3Q96B67 414 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 MRPL38Q96DV4 380 aaKnown RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 SMIM3Q9BZL3 60 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 WWTR1Q9GZV5 400 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 IL23AQ9NPF7 189 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 TBCCD1Q9NVR7 557 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 ARFGEF2Q9Y6D5 1785 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 RGPD5Q99666 1765 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 LCHNA4D1U4 455 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 IGFBP1P08833 259 aaPredicted RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 TNFSF4P23510 183 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 TAP2Q03519 686 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 AARDQ4LEZ3 155 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 PAN3Q58A45 887 aaKnown RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 PSAPL1Q6NUJ1 521 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 EPGNQ6UW88 154 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 LARP4Q71RC2 724 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLN8-201ENST00000331222 PSD4Q8NDX1 1056 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 H1FXQ92522 213 aaKnown RBP10.04□□□□□ -0.8
CLN8-201ENST00000331222 SPTSSAQ969W0 71 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 KIAA1191Q96A73 305 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 SLC25A18Q9H1K4 315 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 HSFX1Q9UBD0 423 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 LGALS13Q9UHV8 139 aa10.04□□□□□ -0.8
CLN8-201ENST00000331222 DLGAP1O14490 977 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 KIAA0355O15063 1070 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 POU3F2P20265 443 aaPredicted RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 CAV2P51636 162 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 PRKXP51817 358 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 DSC1Q08554 894 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 SF3A2Q15428 464 aaKnown RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 UNQ6126/PRO20091Q6UXV3 157 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 NIPA2Q8N8Q9 360 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 CTRCQ99895 268 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 MAPKAP1Q9BPZ7 522 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 DPCDQ9BVM2 203 aaPredicted RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 FOLH1BQ9HBA9 442 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 GPATCH2Q9NW75 528 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 POLR1CO15160 346 aaPredicted RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 FRS3O43559 492 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 GYPBP06028 91 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 OR8U9P0C7N5 309 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 ZNF182P17025 639 aaPredicted RBP10.03□□□□□ -0.8
CLN8-201ENST00000331222 CEBPBP17676 345 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 PSMB10P40306 273 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 P2RY2P41231 377 aa10.03□□□□□ -0.8
CLN8-201ENST00000331222 LCN10Q6JVE6 187 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms