RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 NR2C2APQ86WQ0 139 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 KLBQ86Z14 1044 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 ZNF461Q8TAF7 563 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 AUTS2Q8WXX7 1259 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 SMPDL3AQ92484 453 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 WDR34Q96EX3 536 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 SECISBP2Q96T21 854 aaKnown RBP13.6□□□□□ -0.23
SNX20-202ENST00000330943 ZSCAN5AQ9BUG6 496 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 ZNF334Q9HCZ1 680 aaPredicted RBP13.6□□□□□ -0.23
SNX20-202ENST00000330943 MRPL39Q9NYK5 338 aaKnown RBP13.6□□□□□ -0.23
SNX20-202ENST00000330943 CNIH4Q9P003 139 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 CFAP97Q9P2B7 532 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 SLC9A8Q9Y2E8 581 aa13.6□□□□□ -0.23
SNX20-202ENST00000330943 A0A1W2PQ45 241 aaPredicted RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 A0A1W2PQY0 241 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 HRO43593 1189 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 CKMP06732 381 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SYPP08247 313 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 CXCL3P19876 107 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SSTR2P30874 369 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 TAP2Q03519 686 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 NTRK2Q16620 822 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 GDPD4Q6W3E5 623 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 TMEM91Q6ZNR0 172 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SLC9B2Q86UD5 537 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 GRAMD2AQ8IUY3 354 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 KLHL36Q8N4N3 616 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 PRR14Q9BWN1 585 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 C1QTNF7Q9BXJ2 289 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 CPEB1Q9BZB8 566 aaKnown RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 GHITMQ9H3K2 345 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SYNDIG1Q9H7V2 258 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 HEXA-AS1Q9H8Q6 139 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 C12orf10Q9HB07 376 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 NEUROD4Q9HD90 331 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 EMC7Q9NPA0 242 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SIRT3Q9NTG7 399 aaPredicted RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 SLCO1C1Q9NYB5 712 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SRRDQ9UH36 339 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 POLHQ9Y253 713 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 AUP1Q9Y679 476 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 GSAPA4D1B5 854 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 PLPP1O14494 284 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 NTN1O95631 604 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SDHBP21912 280 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 HLA-FP30511 346 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 BTCP35070 178 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 ATP6V1E1P36543 226 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 BUD31P41223 144 aaPredicted RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 SRP9P49458 86 aaKnown RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 PRLHRP49683 370 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 POLR2LP62875 67 aaKnown RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 TAGLNQ01995 201 aaKnown RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 VASNQ6EMK4 673 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 LUZP2Q86TE4 346 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 CDH24Q86UP0 819 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 MYLIPQ8WY64 445 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 TIFAQ96CG3 184 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SCMH1Q96GD3 660 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 SMG9Q9H0W8 520 aaKnown RBP13.59□□□□□ -0.23
SNX20-202ENST00000330943 C11orf49Q9H6J7 331 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 ZNF224Q9NZL3 707 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 PTGFRNQ9P2B2 879 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 P2RX2Q9UBL9 471 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 HS3ST2Q9Y278 367 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 CACNG2Q9Y698 323 aa13.59□□□□□ -0.23
SNX20-202ENST00000330943 LOC105369274A0A096LPK9 316 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 KDM4EB2RXH2 506 aaPredicted RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 CHST10O43529 356 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 INHAP05111 366 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 EIF4EP06730 217 aaKnown RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 CTSAP10619 480 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 GSTM3P21266 225 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 VIPR1P32241 457 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 CCT3P49368 545 aaKnown RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 DCDC1P59894 354 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 TMEM115Q12893 351 aaPredicted RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 EOGTQ5NDL2 527 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 HENMT1Q5T8I9 393 aaKnown RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 OR4N4Q8N0Y3 316 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 TRAM1L1Q8N609 369 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 SAMD12Q8N8I0 201 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 OR5M3Q8NGP4 307 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 DACT3Q96B18 629 aaPredicted RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 ART5Q96L15 291 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 SGPP1Q9BX95 441 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 OR51I1Q9H343 314 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 CHD9Q3L8U1 2897 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 C7orf66A4D0T2 115 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 FAM170BA6NMN3 283 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 EFCAB14O75071 495 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 SOX9P48436 509 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 ZNF81P51508 661 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 SNTA1Q13424 505 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 EXOSC2Q13868 293 aaKnown RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 POM121L1PQ3SYA9 428 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 KLHL12Q53G59 568 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 RNASE12Q5GAN4 147 aaKnown RBP13.58□□□□□ -0.24
SNX20-202ENST00000330943 SLC30A6Q6NXT4 461 aa13.58□□□□□ -0.24
SNX20-202ENST00000330943 TMEM65Q6PI78 240 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms