RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 COX6A1P12074 109 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC26A5P58743 744 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 NPSR1Q6W5P4 371 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 C16orf62Q7Z3J2 963 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 SPPL2CQ8IUH8 684 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 COX18Q8N8Q8 333 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 ANKFN1Q8N957 763 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 GOLM1Q8NBJ4 401 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 CHDHQ8NE62 594 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 BBS10Q8TAM1 723 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 NACC2Q96BF6 587 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 VMP1Q96GC9 406 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 BTBD9Q96Q07 612 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 TRNT1Q96Q11 434 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 OLAHQ9NV23 265 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 KCND3Q9UK17 655 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 A8MVJ9 347 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 LIPCP11150 499 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 F8A1P23610 371 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 KDELR2P33947 212 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 CLCN2P51788 898 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 CRISP3P54108 245 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 PSG6Q00889 435 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 SSPNQ14714 243 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 EBPQ15125 230 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 SYPL1Q16563 259 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 ARHGAP11BQ3KRB8 267 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 PPP1R32Q7Z5V6 425 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 PATL1Q86TB9 770 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC44A2Q8IWA5 706 aaPredicted RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 C9orf40Q8IXQ3 194 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 C10orf67Q8IYJ2 551 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 EID3Q8N140 333 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 APCDD1LQ8NCL9 501 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 GPR151Q8TDV0 419 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 POP5Q969H6 163 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 RSRC1Q96IZ7 334 aaKnown RBP9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 RNF145Q96MT1 663 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 BTBD2Q9BX70 525 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 BCL2L10Q9HD36 194 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 CALML5Q9NZT1 146 aa9.51□□□□□ -0.89
VIPAS39-201ENST00000327028 GCM2O75603 506 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 PDE9AO76083 593 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 CHRM4P08173 479 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 GABRA3P34903 492 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 TRHRP34981 398 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 ERFP50548 548 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 DCAF7P61962 342 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 POU6F2P78424 691 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 HPCAP84074 193 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 RHDQ02161 417 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 FOXC1Q12948 553 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 ELOAQ14241 798 aaKnown RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 GPAT3Q53EU6 434 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 LRRC23Q53EV4 343 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 RPS26P11Q5JNZ5 115 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 DCST2Q5T1A1 773 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 KIRREL2Q6UWL6 708 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 LRRC74BQ6ZQY2 392 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC29A4Q7RTT9 530 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 STMN2Q93045 179 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 WWTR1Q9GZV5 400 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 Q9N2J8 555 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 DCAF13Q9NV06 445 aaKnown RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF223Q9UK11 482 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 GPR55Q9Y2T6 319 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 DSPPQ9NZW4 1301 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 FRG2CA6NGY1 282 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 PGM3O95394 542 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 H6PDO95479 791 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 SERPINA1P01009 418 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 CT45A8P0DMV1 189 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 CT45A9P0DMV2 189 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 AQP1P29972 269 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 OTX2P32243 289 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 PPICP45877 212 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 EXT1Q16394 746 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 CT45A2Q5DJT8 189 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 CRB2Q5IJ48 1285 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 IL22RA1Q8N6P7 574 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 OR11G2Q8NGC1 345 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 OR8K3Q8NH51 312 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 SLC26A7Q8TE54 656 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 PIK3R3Q92569 461 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 KIAA1143Q96AT1 154 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 DUS3LQ96G46 650 aaKnown RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 TREX2Q9BQ50 279 aaPredicted RBP9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 ZNF350Q9GZX5 532 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 RUBCNLQ9H714 662 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 POLE3Q9NRF9 147 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 KLK13Q9UKR3 277 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 AK5Q9Y6K8 562 aa9.5□□□□□ -0.89
VIPAS39-201ENST00000327028 A0A0G2JPF8 293 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 C2orf92A0A1B0GVN3 265 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 GXYLT2A0PJZ3 443 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 HNRNPCL2B2RXH8 293 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 HNRNPCL3B7ZW38 293 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 MGRN1O60291 552 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 FKBP6O75344 327 aa9.49□□□□□ -0.89
VIPAS39-201ENST00000327028 IFNA14P01570 189 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms