RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 MON1AQ86VX9 555 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 SLC30A8Q8IWU4 369 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 FBXO16Q8IX29 292 aaPredicted RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 NKAIN3Q8N8D7 197 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 CHST14Q8NCH0 376 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 CCNYQ8ND76 341 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 C9orf43Q8TAL5 461 aaPredicted RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 IFI44Q8TCB0 444 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 COL26A1Q96A83 441 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 SLC25A46Q96AG3 418 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 FBXO17Q96EF6 278 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 BSCL2Q96G97 398 aaPredicted RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 MARS2Q96GW9 593 aaKnown RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 ZFP42Q96MM3 310 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF583Q96ND8 569 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 MS4A4EQ96PG1 132 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 CDCA3Q99618 268 aaPredicted RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 PINK1Q9BXM7 581 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 ACTL8Q9H568 366 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 ANKRA2Q9H9E1 313 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 RNF122Q9H9V4 155 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 TXNRD2Q9NNW7 524 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 DDIT4Q9NX09 232 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 LIMD1Q9UGP4 676 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF490Q9ULM2 529 aaPredicted RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 EXO1Q9UQ84 846 aaKnown RBP6.29□□□□□ -1.4
ZNF540-201ENST00000316433 OARD1Q9Y530 152 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 NPTNQ9Y639 398 aa6.29□□□□□ -1.4
ZNF540-201ENST00000316433 A0A087X0M5 115 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 A0A1B0GX30 115 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 LRIT2A6NDA9 550 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 A6NJY4 79 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 SRPRAP08240 638 aaKnown RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 G6PDP11413 515 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PRPS2P11908 318 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 HSD3B1P14060 373 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 NPR2P20594 1047 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 UQCRC2P22695 453 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 HSD3B2P26439 372 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 MSX1P28360 303 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ADORA2BP29275 332 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 EPHA2P29317 976 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CASP2P42575 452 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PTGER3P43115 390 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 MAPK9P45984 424 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PITX1P78337 314 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 MXD1Q05195 221 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ABHD18Q0P651 414 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 UGT8Q16880 541 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ZNF628Q5EBL2 1059 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 SIRPB2Q5JXA9 342 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 FAM182BQ5T319 152 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 BSPRYQ5W0U4 402 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 FAM111BQ6SJ93 734 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 VITQ6UXI7 678 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 TRIM69Q86WT6 500 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ARMC10Q8N2F6 343 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PGBD5Q8N414 524 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 GPRC5AQ8NFJ5 357 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PXT1Q8NFP0 134 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 OR5M9Q8NGP3 310 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 WFIKKN2Q8TEU8 576 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 RFT1Q96AA3 541 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 S100PBPQ96BU1 408 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ULK4Q96C45 1275 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 LYSMD1Q96S90 227 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CCNL2Q96S94 520 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 TAPBPLQ9BX59 468 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CHST8Q9H2A9 424 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CHRDQ9H2X0 955 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CRISPLD1Q9H336 500 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 OR51B6Q9H340 312 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 AMBNQ9NP70 447 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 MYOZ1Q9NP98 299 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 IMP3Q9NV31 184 aaKnown RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 TAS2R3Q9NYW6 316 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 FKBPLQ9UIM3 349 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PPIL1Q9Y3C6 166 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 MRPL42Q9Y6G3 142 aaKnown RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 VWA8A3KMH1 1905 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ALPK3Q96L96 1907 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 DENND4CQ5VZ89 1909 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 SNAPC5O75971 98 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 GLP2RO95838 553 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 C1RP00736 705 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 CRYABP02511 175 aaKnown RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ALDOBP05062 364 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 C6P13671 934 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 GABRB1P18505 474 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PPIBP23284 216 aaKnown RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 HOXA9P31269 272 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 PNLIPRP1P54315 467 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 ITGA1P56199 1179 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 TLE2Q04725 743 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 HNRNPA0Q13151 305 aaKnown RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 GPR176Q14439 515 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 HLXQ14774 488 aaPredicted RBP6.28□□□□□ -1.4
ZNF540-201ENST00000316433 RPS6KA2Q15349 733 aa6.28□□□□□ -1.4
ZNF540-201ENST00000316433 P2RY14Q15391 338 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms