RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 JUNP05412 331 aaKnown RBP17.79■□□□□ 0.44
LIME1-201ENST00000309546 CT45A8P0DMV1 189 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 CT45A9P0DMV2 189 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 MPIP34949 423 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 NCBP2P52298 156 aaKnown RBP eCLIP17.79■□□□□ 0.442e-18■■□□□ 12.4
LIME1-201ENST00000309546 NAA20P61599 178 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 SF3B4Q15427 424 aaKnown RBP eCLIP17.79■□□□□ 0.447e-24■■■■□ 26
LIME1-201ENST00000309546 CT45A2Q5DJT8 189 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 NHSL2Q5HYW2 709 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 SH2D4BQ5SQS7 431 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 NPSR1Q6W5P4 371 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 LARP4Q71RC2 724 aaKnown RBP eCLIP17.79■□□□□ 0.445e-8■■■□□ 14.9
LIME1-201ENST00000309546 SLC44A2Q8IWA5 706 aaPredicted RBP17.79■□□□□ 0.44
LIME1-201ENST00000309546 C4orf33Q8N1A6 199 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 WDYHV1Q96HA8 205 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 VSTM2LQ96N03 204 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 SLC24A3Q9HC58 644 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 TNFRSF12AQ9NP84 129 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 RRAGDQ9NQL2 400 aaPredicted RBP17.79■□□□□ 0.44
LIME1-201ENST00000309546 SIRT5Q9NXA8 310 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 EXO1Q9UQ84 846 aaKnown RBP17.79■□□□□ 0.44
LIME1-201ENST00000309546 L3MBTL1Q9Y468 752 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 OR10H1Q9Y4A9 318 aa17.79■□□□□ 0.44
LIME1-201ENST00000309546 H3BQF6 201 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 ABCB7O75027 752 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 COQ9O75208 318 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 RSL1D1O76021 490 aaKnown RBP17.78■□□□□ 0.44
LIME1-201ENST00000309546 CPA3P15088 417 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 KRT4P19013 534 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 POU3F2P20265 443 aaPredicted RBP17.78■□□□□ 0.44
LIME1-201ENST00000309546 NTSP30990 170 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 CRHR1P34998 444 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 MC3RP41968 323 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 DNAJB13P59910 316 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 EFR3AQ14156 821 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 CEBPEQ15744 281 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 PRSS53Q2L4Q9 553 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 NSUN5P2Q63ZY6 315 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 CLEC6AQ6EIG7 209 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 ARSKQ6UWY0 536 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 TDRPQ86YL5 185 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 EIF1ADQ8N9N8 165 aaKnown RBP17.78■□□□□ 0.44
LIME1-201ENST00000309546 WDSUB1Q8N9V3 476 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 EFHD2Q96C19 240 aaPredicted RBP17.78■□□□□ 0.44
LIME1-201ENST00000309546 SLC35A4Q96G79 324 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 STMN4Q9H169 189 aaPredicted RBP17.78■□□□□ 0.44
LIME1-201ENST00000309546 PPCSQ9HAB8 311 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 MYNNQ9NPC7 610 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 OXSMQ9NWU1 459 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 TAS2R9Q9NYW1 312 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 FIS1Q9Y3D6 152 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 WIF1Q9Y5W5 379 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 DOCK7Q96N67 2140 aa17.78■□□□□ 0.44
LIME1-201ENST00000309546 ANKRD17O75179 2603 aaKnown RBP17.78■□□□□ 0.44
LIME1-201ENST00000309546 MYO1GB0I1T2 1018 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 PLOD3O60568 738 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 TSPAN2O60636 221 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 CBR3O75828 277 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 ACTL6AO96019 429 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 TCEA1P23193 301 aaKnown RBP17.77■□□□□ 0.44
LIME1-201ENST00000309546 CEACAM8P31997 349 aaPredicted RBP17.77■□□□□ 0.44
LIME1-201ENST00000309546 TIMP3P35625 211 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 ASCL1P50553 236 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 SRYQ05066 204 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 RCAN2Q14206 197 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 LIPMQ5VYY2 423 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 OR5M10Q6IEU7 315 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 FAM71E1Q6IPT2 247 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 TMEM107Q6UX40 140 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 TRIM46Q7Z4K8 759 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 ZZZ3Q8IYH5 903 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 OR4N2Q8NGD1 307 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 LRRC46Q96FV0 321 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 OR2B2Q9GZK3 357 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 DKKL1Q9UK85 242 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 PTGDR2Q9Y5Y4 395 aa17.77■□□□□ 0.44
LIME1-201ENST00000309546 H0Y3Z8 333 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 UROSP10746 265 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 CYP4B1P13584 511 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 AGFG1P52594 562 aaKnown RBP17.76■□□□□ 0.43
LIME1-201ENST00000309546 ZNF136P52737 540 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 NOXRED1Q6NXP6 359 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 IFNEQ86WN2 208 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 PLCZ1Q86YW0 608 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 FAM76AQ8TAV0 307 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 IQCGQ9H095 443 aaKnown RBP17.76■□□□□ 0.43
LIME1-201ENST00000309546 DDX18Q9NVP1 670 aaKnown RBP17.76■□□□□ 0.43
LIME1-201ENST00000309546 TAS2R10Q9NYW0 307 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 MID2Q9UJV3 735 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 FBXL2Q9UKC9 423 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 CCDC168Q8NDH2 2452 aa17.76■□□□□ 0.43
LIME1-201ENST00000309546 TACC2O95359 2948 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 TLDC2A0PJX2 215 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 CD8B2A6NJW9 211 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 SCO2O43819 266 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 SEC22BO75396 215 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 GRK2P25098 689 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 KIR2DL3P43628 341 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 PNLIPRP2P54317 469 aa17.75■□□□□ 0.43
LIME1-201ENST00000309546 PSPHP78330 225 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms