RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 SIDT2Q8NBJ9 832 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CLEC18CQ8NCF0 446 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 BPIFB6Q8NFQ5 453 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OR7A2PQ8NGA2 310 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OR4F6Q8NGB9 312 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OR52B6Q8NGF0 335 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OR6Q1Q8NGQ2 317 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OR6K2Q8NGY2 324 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OR10A6Q8NH74 314 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 WDR36Q8NI36 951 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FBXO30Q8TB52 745 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 DYNC2LI1Q8TCX1 351 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 STARD8Q92502 1023 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FIG4Q92562 907 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 USP7Q93009 1102 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FAM162AQ96A26 154 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 TAMM41Q96BW9 452 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FAM120BQ96EK7 910 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CMTM7Q96FZ5 175 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FCRL1Q96LA6 429 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF300Q96RE9 604 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SIGLEC11Q96RL6 698 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PITX2Q99697 317 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 CPPED1Q9BRF8 314 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ABCG4Q9H172 646 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OR10A2Q9H208 303 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 MMP27Q9H306 513 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 LRTM1Q9HBL6 345 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 IL1RAPQ9NPH3 570 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 FOXJ2Q9P0K8 574 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 VAPAQ9P0L0 249 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 IL17CQ9P0M4 197 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 OPTCQ9UBM4 332 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 DAPK2Q9UIK4 370 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 RPS6KA6Q9UK32 745 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 NDRG4Q9ULP0 352 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 TDRKHQ9Y2W6 561 aaKnown RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PKP3Q9Y446 797 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 POLR3HQ9Y535 204 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 ANGPTL3Q9Y5C1 460 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 MN1Q10571 1320 aaPredicted RBP4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SVILO95425 2214 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 PDZD2O15018 2839 aa4.62□□□□□ -1.67
CKS1B-201ENST00000308987 SETD2Q9BYW2 2564 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ZGRF1Q86YA3 2104 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PRAMEF33A0A0G2JMD5 474 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 A0A0G2JNJ9 132 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NCF1BA6NI72 391 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 AGAP14A8MT82 685 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 A8MVJ9 347 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NCF1CA8MVU1 366 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 EVPLLA8MZ36 301 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 TMX2-CTNND1H3BSU7 103 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 J3QRK9 145 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PLD2O14939 933 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SLC16A5O15375 505 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 TAPBPO15533 448 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 RGS10O43665 173 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 HS6ST1O60243 411 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PRAMEF10O60809 474 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SEC22BO75396 215 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 E2F6O75461 281 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 JRKO75564 520 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 STK16O75716 305 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SNX4O95219 450 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CLDN9O95484 217 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 SEMG1P04279 462 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ABCB1P08183 1280 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 TFPTP0C1Z6 253 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PIRTP0C851 137 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 BCKDHAP12694 445 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NCF1P14598 390 aaPredicted RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 IL7RP16871 459 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ITGALP20701 1170 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PTPN6P29350 595 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 S100A3P33764 101 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 IDUAP35475 653 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 HPCAL1P37235 193 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PIGAP37287 484 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 HALP42357 657 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 TMED10P49755 219 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 DGKQP52824 942 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 MLLT10P55197 1068 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 RPL38P63173 70 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 CD83Q01151 205 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 TLE1Q04724 770 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ZFP36L1Q07352 338 aaKnown RBP4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ATP1A4Q13733 1029 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 PTPRCAPQ14761 206 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ABRAXAS2Q15018 415 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 GPR19Q15760 415 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NPTX1Q15818 432 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 IGFBP7Q16270 282 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 BCL2A1Q16548 175 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 NDUFA5Q16718 116 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 IMPG1Q17R60 797 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF181Q2M3W8 571 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 ALG11Q2TAA5 492 aa4.61□□□□□ -1.67
CKS1B-201ENST00000308987 FAM174BQ3ZCQ3 159 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms