RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 SLC29A1Q99808 456 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 CIB1Q99828 191 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 TREX2Q9BQ50 279 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 DOHHQ9BU89 302 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 SLC7A5P2Q9GIP4 190 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 VN1R1Q9GZP7 353 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 SLC38A1Q9H2H9 487 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 COQ10BQ9H8M1 238 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 IL1RAPQ9NPH3 570 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 MKKSQ9NPJ1 570 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 ADPRHL2Q9NX46 363 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 TOR4AQ9NXH8 423 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 VNN3Q9NY84 501 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 DTX4Q9Y2E6 619 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 DTNAQ9Y4J8 743 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 GPC6Q9Y625 555 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 ZZEF1O43149 2961 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 IGLV3-12A0A075B6K2 115 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 TCRBV16S1A1N1A0A5B0 115 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 A8MVJ9 347 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 hCG_2039718K7EN88 272 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 PDLIM1O00151 329 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 SOCS2O14508 198 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 CNOT3O75175 753 aaKnown RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 DIRAS1O95057 198 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 CST1P01037 141 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 LDLRP01130 860 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 IFNA16P05015 189 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 CCKBRP32239 447 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 GALNSP34059 522 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 EMDP50402 254 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 ANXA11P50995 505 aaKnown RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 IST1P53990 364 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 CRISP3P54108 245 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 TXNL4AP83876 142 aaKnown RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 INSM1Q01101 510 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 MC2RQ01718 297 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 FUT7Q11130 342 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 SERTAD2Q14140 314 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF267Q14586 743 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 IL11RAQ14626 422 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 DUSP7Q16829 419 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 NKAIN1Q4KMZ8 207 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 GPAT3Q53EU6 434 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 C19orf48Q6RUI8 117 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 SHISA6Q6ZSJ9 500 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 FKBP9P1Q75LS8 142 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 HMGN2P46Q86SG4 172 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 COMTD1Q86VU5 262 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 METTL25Q8N6Q8 603 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 BBS10Q8TAM1 723 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 PTPMT1Q8WUK0 201 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 APOBEC4Q8WW27 367 aaKnown RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 DNAJC9Q8WXX5 260 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 POP5Q969H6 163 aaKnown RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 EME1Q96AY2 570 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 VPS50Q96JG6 964 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF184Q99676 751 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 TGIF2Q9GZN2 237 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 QRSL1Q9H0R6 528 aaKnown RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 AKIRIN1Q9H9L7 192 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 FOLH1BQ9HBA9 442 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 BCL2L10Q9HD36 194 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 PNO1Q9NRX1 252 aaKnown RBP6.48□□□□□ -1.37
PTCD2-201ENST00000308077 GIN1Q9NXP7 522 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 OAZ3Q9UMX2 235 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 ERVK-19Q9WJR5 959 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 DSPPQ9NZW4 1301 aa6.48□□□□□ -1.37
PTCD2-201ENST00000308077 NAV3Q8IVL0 2385 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ITPR1Q14643 2758 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 GXYLT2A0PJZ3 443 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PMS2P1A4D2B8 440 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 TMEM247A6NEH6 219 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 A8MUA0 341 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 POLR1CO15160 346 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 KALRNO60229 2985 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 FCMRO60667 390 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 LRP3O75074 770 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 DEAF1O75398 565 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 RFPL3O75679 317 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 EPPINO95925 133 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ONECUT2O95948 504 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PRB1P04280 392 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 FABP3P05413 133 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ITIH1P19827 911 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ETV5P41161 510 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 OR1E2P47887 323 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PGDP52209 483 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 MAPK10P53779 464 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 DCDP81605 110 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PSG6Q00889 435 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CHRNEQ04844 493 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 ZNF155Q12901 538 aaPredicted RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PPP1R8Q12972 351 aaKnown RBP6.47□□□□□ -1.37
PTCD2-201ENST00000308077 IFI44LQ53G44 452 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CCNJQ5T5M9 372 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PRAMEF8Q5VWM4 474 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 PRAMEF7Q5VXH5 474 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 CDCP2Q5VXM1 449 aa6.47□□□□□ -1.37
PTCD2-201ENST00000308077 TBPL2Q6SJ96 375 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms