RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 OR4F15Q8NGB8 312 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 OR8K3Q8NH51 312 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 ISG20Q96AZ6 181 aaKnown RBP12.57□□□□□ -0.4
DDX54-201ENST00000306014 DOK1Q99704 481 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 SLC46A2Q9BY10 475 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 FBXL12Q9NXK8 326 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 COQ3Q9NZJ6 369 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 MGAT4AQ9UM21 535 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 MAB21L2Q9Y586 359 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 SSC5DA1L4H1 1573 aa12.57□□□□□ -0.4
DDX54-201ENST00000306014 B4GALT3O60512 393 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 SCG5P05408 212 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 FURINP09958 794 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 CLEC2LP0C7M8 214 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 APEX1P27695 318 aaKnown RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 NTHL1P78549 312 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 SFRP4Q6FHJ7 346 aaPredicted RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 HTR3DQ70Z44 454 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 UBE2Q1Q7Z7E8 422 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 NRSN1Q8IZ57 195 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 CYB561A3Q8NBI2 242 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 SPRYD4Q8WW59 207 aaPredicted RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 ACOT12Q8WYK0 555 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 ZNF566Q969W8 418 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 OTUB2Q96DC9 234 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 YIPF6Q96EC8 236 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 S100A16Q96FQ6 103 aaKnown RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 GTPBP2Q9BX10 602 aaKnown RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 MBD2Q9UBB5 411 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 SNX11Q9Y5W9 270 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 LOC105369274A0A096LPK9 316 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 A0A0G2JPF8 293 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 HNRNPCL3B7ZW38 293 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 TACSTD2P09758 323 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 H2AFB2P0C5Z0 115 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 HNRNPCL4P0DMR1 293 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 PSMA6P60900 246 aaKnown RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 RAB40BQ12829 278 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 SLC14A1Q13336 389 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 DHCR24Q15392 516 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 DUSP7Q16829 419 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 ABHD13Q7L211 337 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 WDR53Q7Z5U6 358 aaPredicted RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 OR4N4Q8N0Y3 316 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 CAMKVQ8NCB2 501 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 OR51L1Q8NGJ5 315 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 EGLN3Q9H6Z9 239 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 TMEM5Q9Y2B1 443 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 OR1A2Q9Y585 309 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 PCDHGB2Q9Y5G2 931 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 POLR2AP24928 1970 aaKnown RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 TEX13CA0A0J9YWL9 993 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 GRXCR1A8MXD5 290 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 NCR1O76036 304 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 CBLP22681 906 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 UQCRC1P31930 480 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 KCNJ10P78508 379 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 GPM6BQ13491 265 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 FIGNL1Q6PIW4 674 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 GPALPP1Q8IXQ4 340 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 FBXO15Q8NCQ5 510 aaPredicted RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 MCCC1Q96RQ3 725 aaPredicted RBP12.56□□□□□ -0.4
DDX54-201ENST00000306014 PCDHGA3Q9Y5H0 932 aa12.56□□□□□ -0.4
DDX54-201ENST00000306014 TMEM202A6NGA9 273 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 CD2P06729 351 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 IL1RNP18510 177 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 PSMB5P28074 263 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 MC3RP41968 323 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 DNASE1L1P49184 302 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 PRLHRP49683 370 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 ADAM8P78325 824 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 SIM1P81133 766 aaPredicted RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 EIF2B5Q13144 721 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 ENPP2Q13822 863 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 HSD17B12Q53GQ0 312 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 FAM180AQ6UWF9 173 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 MSRB3Q8IXL7 192 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 CHFRQ96EP1 664 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 TRMT2BQ96GJ1 504 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 HSPA12BQ96MM6 686 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 CXorf36Q9H7Y0 433 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 DDX31Q9H8H2 851 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 NANSQ9NR45 359 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 TXNL4BQ9NX01 149 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 A3GALT2U3KPV4 340 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 SLC22A31A6NKX4 558 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 FCRLBQ6BAA4 426 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 CPXM2Q8N436 756 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 BADQ92934 168 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 ALG8Q9BVK2 526 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 DPH1Q9BZG8 443 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 CLEC4EQ9ULY5 219 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 CSO75390 466 aaKnown RBP12.55□□□□□ -0.4
DDX54-201ENST00000306014 GABRA3P34903 492 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 HYAL2Q12891 473 aa12.55□□□□□ -0.4
DDX54-201ENST00000306014 B3GLCTQ6Y288 498 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms