RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 PRAP1Q96NZ9 151 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 LRRC37BQ96QE4 947 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 FGFR1OP2Q9NVK5 253 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 DKKL1Q9UK85 242 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 PROCRQ9UNN8 238 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 MSTNO14793 375 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 RIPK2O43353 540 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 CLPTM1O96005 669 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 AOAHP28039 575 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 ERFP50548 548 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 TAS2R40P59535 323 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 NAE1Q13564 534 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 TRIP13Q15645 432 aaPredicted RBP5.41□□□□□ -1.54
ZNF440-201ENST00000304060 FBXL19-AS1Q494R0 122 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 CCDC58Q4VC31 144 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 SIAH3Q8IW03 269 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 NMD3Q96D46 503 aaKnown RBP5.41□□□□□ -1.54
ZNF440-201ENST00000304060 ZNF486Q96H40 463 aaPredicted RBP5.41□□□□□ -1.54
ZNF440-201ENST00000304060 TTTY12Q9BZ98 90 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 PITHD1Q9GZP4 211 aaPredicted RBP5.41□□□□□ -1.54
ZNF440-201ENST00000304060 CALHM2Q9HA72 323 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 NKIRAS1Q9NYS0 192 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 KIF17Q9P2E2 1029 aa5.41□□□□□ -1.54
ZNF440-201ENST00000304060 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.41□□□□□ -1.54
ZNF440-201ENST00000304060 WBP11Q9Y2W2 641 aaKnown RBP5.41□□□□□ -1.54
ZNF440-201ENST00000304060 LRP4O75096 1905 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 SPTBP11277 2137 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 AGAP14A8MT82 685 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 C16orf97H3BN30 126 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 KPNA4O00629 521 aaPredicted RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 FFAR3O14843 346 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 GPR42O15529 346 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 SULT1B1O43704 296 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 DNAJA2O60884 412 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 CDC123O75794 336 aaPredicted RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 ECDO95905 644 aaPredicted RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 POU2F1P14859 743 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 PSMA4P25789 261 aaKnown RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 ST13P50502 369 aaKnown RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 ACTG1P63261 375 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 RUNX1T1Q06455 604 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 TRADDQ15628 312 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 FBXO42Q6P3S6 717 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 LCTLQ6UWM7 567 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 ULK2Q8IYT8 1036 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 NKAPQ8N5F7 415 aaKnown RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 NATD1Q8N6N6 113 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 CNEP1R1Q8N9A8 125 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 OR14L1PQ8NHC6 308 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 C1orf54Q8WWF1 131 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 TANKQ92844 425 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 NCLNQ969V3 563 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 DUS3LQ96G46 650 aaKnown RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 OXNAD1Q96HP4 312 aaPredicted RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 ZBTB18Q99592 522 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 BCL7BQ9BQE9 202 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 PTGES2Q9H7Z7 377 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 UGT2A1Q9Y4X1 527 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 PMF1-BGLAPU3KQ54 211 aa5.4□□□□□ -1.54
ZNF440-201ENST00000304060 PRRC2AP48634 2157 aaKnown RBP5.4□□□□□ -1.54
ZNF440-201ENST00000304060 LOC105369274A0A096LPK9 316 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 LOC102723532A0A0G2JNH3 316 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 GAPDHSO14556 408 aaPredicted RBP5.4□□□□□ -1.55
ZNF440-201ENST00000304060 KLF11O14901 512 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 TP73O15350 636 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 KERAO60938 352 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 TNFRSF21O75509 655 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 FAM157CP0CG43 387 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 RFC3P40938 356 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 SLCO1A2P46721 670 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 IL2P60568 153 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 CAPRIN1Q14444 709 aaKnown RBP5.4□□□□□ -1.55
ZNF440-201ENST00000304060 FAM83EQ2M2I3 478 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 TOR1AIP1Q5JTV8 583 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 ZNF600Q6ZNG1 722 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 KIAA0408Q6ZU52 694 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 CLVS1Q8IUQ0 354 aaPredicted RBP5.4□□□□□ -1.55
ZNF440-201ENST00000304060 CHERPQ8IWX8 916 aaKnown RBP5.4□□□□□ -1.55
ZNF440-201ENST00000304060 PPIL6Q8IXY8 311 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 OR4N4Q8N0Y3 316 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 TCAIMQ8N3R3 496 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 LILRA3Q8N6C8 439 aaPredicted RBP5.4□□□□□ -1.55
ZNF440-201ENST00000304060 KCT2Q8NC54 265 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 WFDC11Q8NEX6 87 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 OR4K17Q8NGC6 315 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 OR2A1Q8NGT9 310 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 SGMS2Q8NHU3 365 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 ASB11Q8WXH4 323 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 ZNF845Q96IR2 970 aaPredicted RBP5.4□□□□□ -1.55
ZNF440-201ENST00000304060 SFXN2Q96NB2 322 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 C12orf65Q9H3J6 166 aaKnown RBP5.4□□□□□ -1.55
ZNF440-201ENST00000304060 SLA2Q9H6Q3 261 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 PELI2Q9HAT8 420 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 PNPLA3Q9NST1 481 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 ADGRE2Q9UHX3 823 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 TCAF1Q9Y4C2 921 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 JMJD1CQ15652 2540 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 KCNE1BA0A087WTH5 132 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 CD8B2A6NJW9 211 aa5.4□□□□□ -1.55
ZNF440-201ENST00000304060 SLC22A2O15244 555 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms