RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 FOLH1BQ9HBA9 442 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 CNIH4Q9P003 139 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 VSTM5A8MXK1 200 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 EDN1P05305 212 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 SDC1P18827 310 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 PCGF2P35227 344 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 GNMTQ14749 295 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 BEST3Q8N1M1 668 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF296Q8WUU4 475 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 FANCFQ9NPI8 374 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 BTNL2Q9UIR0 455 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 MYH7BA7E2Y1 1941 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 CNMDO75829 334 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 KEAP1Q14145 624 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 DCAF13Q9NV06 445 aaKnown RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 TMEM45AQ9NWC5 275 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF226Q9NYT6 803 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 PPP1R3DO95685 299 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 PTTG1O95997 202 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 RORAP35398 523 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 RAB11BQ15907 218 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 FCRLBQ6BAA4 426 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 GPR26Q8NDV2 337 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 CHDHQ8NE62 594 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 TOR1AIP2Q8NFQ8 470 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 OR2T4Q8NH00 348 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 ANKMY1Q9P2S6 941 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 GLS2Q9UI32 602 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 KCNS2Q9ULS6 477 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 MAGED1Q9Y5V3 778 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 M0R129 80 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 OPRL1P41146 370 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 INHBCP55103 352 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 C3orf33Q6P1S2 294 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 ADGRG5Q8IZF4 528 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 CBARPQ8N350 705 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 ZNF709Q8N972 641 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 SAMD11Q96NU1 681 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 TREX1Q9NSU2 369 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 BCAS1O75363 584 aaPredicted RBP13.22□□□□□ -0.29
PRKCB-201ENST00000303531 CTBP2P56545 445 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 BCL7BQ9BQE9 202 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 SLC7A7Q9UM01 511 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 MYH1P12882 1939 aa13.22□□□□□ -0.29
PRKCB-201ENST00000303531 E2F3O00716 465 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 SMAD6O43541 496 aaKnown RBP13.21□□□□□ -0.29
PRKCB-201ENST00000303531 CERS1P27544 350 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 NTSR1P30989 418 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 RAET1LQ5VY80 246 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 LARP4Q71RC2 724 aaKnown RBP eCLIP13.21□□□□□ -0.291e-6■■■■□ 21.3
PRKCB-201ENST00000303531 UBQLNLQ8IYU4 475 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 FAM46BQ96A09 425 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 DPH1Q9BZG8 443 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 AGPAT4Q9NRZ5 378 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 URB1O60287 2271 aaKnown RBP13.21□□□□□ -0.29
PRKCB-201ENST00000303531 RNASET2O00584 256 aaKnown RBP13.21□□□□□ -0.29
PRKCB-201ENST00000303531 OR6Q1Q8NGQ2 317 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 DMRT3Q9NQL9 472 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 C12orf71A8MTZ7 269 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 PHYHO14832 338 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 CPZQ66K79 652 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 PITX2Q99697 317 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 INTS6Q9UL03 887 aaKnown RBP13.21□□□□□ -0.29
PRKCB-201ENST00000303531 ADAMTS5Q9UNA0 930 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 VSTM2BA6NLU5 285 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 HHEXQ03014 270 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 SLC18B1Q6NT16 456 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 TMEM205Q6UW68 189 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 SYT14Q8NB59 555 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 OR51L1Q8NGJ5 315 aa13.21□□□□□ -0.29
PRKCB-201ENST00000303531 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.21□□□□□ -0.295e-7■■■■■ 29.2
PRKCB-201ENST00000303531 PPIL3Q9H2H8 161 aaKnown RBP13.21□□□□□ -0.29
PRKCB-201ENST00000303531 TRIM64A6NGJ6 449 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 GCAP28676 217 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.3
PRKCB-201ENST00000303531 WNT4P56705 351 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 EIF2S3LQ2VIR3 472 aaKnown RBP13.21□□□□□ -0.3
PRKCB-201ENST00000303531 DEFB110Q30KQ9 67 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 HES5Q5TA89 166 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 USP53Q70EK8 1073 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 MS4A4EQ96PG1 132 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 IL23AQ9NPF7 189 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 CYBAP13498 195 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 CTXN1P60606 82 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 VEZF1Q14119 521 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF761Q86XN6 746 aaPredicted RBP13.21□□□□□ -0.3
PRKCB-201ENST00000303531 ARHGAP12Q8IWW6 846 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 TRMT10AQ8TBZ6 339 aaKnown RBP13.21□□□□□ -0.3
PRKCB-201ENST00000303531 NEIL2Q969S2 332 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 C3orf30Q96M34 536 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF300Q96RE9 604 aaPredicted RBP13.21□□□□□ -0.3
PRKCB-201ENST00000303531 ACPTQ9BZG2 426 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 LINC00597Q9H2U6 94 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 RNF186Q9NXI6 227 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 RIMS3Q9UJD0 308 aa13.21□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF850A8MQ14 1090 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 PPP6CO00743 305 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 MC3RP41968 323 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 NTHL1P78549 312 aa13.2□□□□□ -0.3
PRKCB-201ENST00000303531 LRP8Q14114 963 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms