RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 TEX47Q8TBZ9 253 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 DEDD2Q8WXF8 326 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 COL26A1Q96A83 441 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 PHF21AQ96BD5 680 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 MSLNLQ96KJ4 702 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 BBS4Q96RK4 519 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 GDF15Q99988 308 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 TRIM45Q9H8W5 580 aaPredicted RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 SEMA4GQ9NTN9 838 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 MAPRE3Q9UPY8 281 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 TRPM6Q9BX84 2022 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 A8MVJ9 347 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 PI15O43692 258 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 ALAS2P22557 587 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 HOXD11P31277 338 aaPredicted RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 RPL3P39023 403 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 SRP9P49458 86 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 AGFG1P52594 562 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 TOR1AIP1Q5JTV8 583 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 CEP78Q5JTW2 689 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 PLPP4Q5VZY2 271 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 RFPL4BQ6ZWI9 263 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 SPRED2Q7Z698 418 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 NR2C2APQ86WQ0 139 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 KRT78Q8N1N4 520 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 MORN4Q8NDC4 146 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 OR7G1Q8NGA0 311 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 SPRYD4Q8WW59 207 aaPredicted RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 WDFY2Q96P53 400 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 MS4A8Q9BY19 250 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 POLDIP3Q9BY77 421 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 ZSCAN32Q9NX65 697 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 P2RX2Q9UBL9 471 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 TEKT2Q9UIF3 430 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 CACNA1CQ13936 2221 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 KIF26AQ9ULI4 1882 aaPredicted RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 C12orf71A8MTZ7 269 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 LYRM1O43325 122 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 TPD52L2O43399 206 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 FCMRO60667 390 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 TRIM23P36406 574 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 IL12RB1P42701 662 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 SNRPNP63162 240 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 CHRNEQ04844 493 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 FAPQ12884 760 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 LTB4RQ15722 352 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 ZNF628Q5EBL2 1059 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 SLC39A5Q6ZMH5 540 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 SYT9Q86SS6 491 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 OR4M1Q8NGD0 313 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 FCRL4Q96PJ5 515 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 SECISBP2Q96T21 854 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 AICDAQ9GZX7 198 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 MOSPD1Q9UJG1 213 aa12.73□□□□□ -0.37
CTTN-201ENST00000301843 ZFR2Q9UPR6 939 aaKnown RBP12.73□□□□□ -0.37
CTTN-201ENST00000301843 PRRT4C9JH25 899 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 NDUFS4O43181 175 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 FGF18O76093 207 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 PEPDP12955 493 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 TBXA2RP21731 343 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 ACADLP28330 430 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 AHRP35869 848 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 WASP42768 502 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 CLCNKAP51800 687 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 PCBP4P57723 403 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 CAMK1Q14012 370 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 OCLNQ16625 522 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 RRM2BQ7LG56 351 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 OR4Q3Q8NH05 313 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 PPIL3Q9H2H8 161 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 DDX31Q9H8H2 851 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 OR1A2Q9Y585 309 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 ALX3O95076 343 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 MRPL3P09001 348 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 SMSP52788 366 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 OR10A3P58181 314 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 ZNF658BQ4V348 819 aaPredicted RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 SLC27A4Q6P1M0 643 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 KRT74Q7RTS7 529 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 OR5H6Q8NGV6 325 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 ATF6BQ99941 703 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 UCKL1Q9NWZ5 548 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 PLEKHM1Q9Y4G2 1056 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 SIRT4Q9Y6E7 314 aaPredicted RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 LAMA1P25391 3075 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 PLXNA2O75051 1894 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 GABRPO00591 440 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 MAGEB4O15481 346 aaPredicted RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 SRPRAP08240 638 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 ELK1P19419 428 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 SLC1A3P43003 542 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 ELOAQ14241 798 aaKnown RBP12.72□□□□□ -0.37
CTTN-201ENST00000301843 GDPGP1Q6ZNW5 385 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 QSOX2Q6ZRP7 698 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 RAD51AP1Q96B01 352 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 AMDHD1Q96NU7 426 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 FUZQ9BT04 418 aa12.72□□□□□ -0.37
CTTN-201ENST00000301843 RNF32Q9H0A6 362 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms