RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 SCO2O43819 266 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 DRD1P21728 446 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 BUD31P41223 144 aaPredicted RBP20.6■□□□□ 0.89
TPM4-201ENST00000300933 SLC15A1P46059 708 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 PPP1CAP62136 330 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 FRMPD2BQ6IN97 320 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 PRSS41Q7RTY9 318 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 UBQLNLQ8IYU4 475 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 CYP4Z2PQ8N1L4 340 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 FAM160A2Q8N612 972 aaPredicted RBP20.6■□□□□ 0.89
TPM4-201ENST00000300933 KBTBD8Q8NFY9 601 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 CEP19Q96LK0 163 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 IL4I1Q96RQ9 567 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 C11orf16Q9NQ32 467 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 P2RX2Q9UBL9 471 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 CYP8B1Q9UNU6 501 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 TNRC18O15417 2968 aaPredicted RBP20.6■□□□□ 0.89
TPM4-201ENST00000300933 TRIOBPQ9H2D6 2365 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 OR10H3O60404 316 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 KIAA1024LP59773 190 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 SIM1P81133 766 aaPredicted RBP20.6■□□□□ 0.89
TPM4-201ENST00000300933 ARMCX4Q5H9R4 360 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 C6orf132Q5T0Z8 1188 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 USP30Q70CQ3 517 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 ZNF438Q7Z4V0 828 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 TRIM48Q8IWZ4 208 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 SLC22A18ASQ8N1D0 253 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 DEFB119Q8N690 84 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 OR2A14Q96R47 310 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 NXF2Q9GZY0 626 aaKnown RBP20.6■□□□□ 0.89
TPM4-201ENST00000300933 STARD5Q9NSY2 213 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 CES1P1Q9UKY3 287 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 ENTPD4Q9Y227 616 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 MRPS2Q9Y399 296 aaKnown RBP20.6■□□□□ 0.89
TPM4-201ENST00000300933 PEX16Q9Y5Y5 336 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 HEBP2Q9Y5Z4 205 aa20.6■□□□□ 0.89
TPM4-201ENST00000300933 MN1Q10571 1320 aaPredicted RBP20.59■□□□□ 0.89
TPM4-201ENST00000300933 PTHP01270 115 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 KCNJ5P48544 419 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 RNF144AP50876 292 aaPredicted RBP20.59■□□□□ 0.89
TPM4-201ENST00000300933 HOXC5Q00444 222 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 CDK10Q15131 360 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 SLC48A1Q6P1K1 146 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 FCGR1BQ92637 280 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 GGHQ92820 318 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 IMPAD1Q9NX62 359 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 SHISA7A6NL88 538 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 CCRL2O00421 344 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 EPPINO95925 133 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 F3P13726 295 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 PTNP21246 168 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 CBLP22681 906 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 CHMP24386 653 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 ELOAQ14241 798 aaKnown RBP20.59■□□□□ 0.89
TPM4-201ENST00000300933 FAM214AQ32MH5 1076 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 C11orf74Q86VG3 221 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 ZNF607Q96SK3 696 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 PSORS1C1Q9UIG5 152 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 DUSP12Q9UNI6 340 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 VPS13AQ96RL7 3174 aa20.59■□□□□ 0.89
TPM4-201ENST00000300933 E9PQ18 207 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 RGS5O15539 181 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 KCNJ13O60928 360 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 UGT2B7P16662 529 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 LSSP48449 732 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 HMGA2P52926 109 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 UGT2B15P54855 530 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 TRA2BP62995 288 aaKnown RBP20.58■□□□□ 0.89
TPM4-201ENST00000300933 BCDIN3DQ7Z5W3 292 aaKnown RBP20.58■□□□□ 0.89
TPM4-201ENST00000300933 FLVCR1-AS1Q8TAF5 88 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 CLIP3Q96DZ5 547 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 ST6GAL2Q96JF0 529 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 ZNF354BQ96LW1 612 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 SNX18Q96RF0 628 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 MKLN1Q9UL63 735 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 TBC1D24Q9ULP9 559 aa20.58■□□□□ 0.89
TPM4-201ENST00000300933 SEMA4FO95754 770 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 CNR2P34972 360 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 TBCEQ15813 527 aaPredicted RBP20.58■□□□□ 0.88
TPM4-201ENST00000300933 ZNF770Q6IQ21 691 aaPredicted RBP20.58■□□□□ 0.88
TPM4-201ENST00000300933 TBC1D19Q8N5T2 526 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 OR6T1Q8NGN1 323 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 SLC7A13Q8TCU3 470 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 CHAC2Q8WUX2 184 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 BEX2Q9BXY8 128 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 SCML1Q9UN30 329 aa20.58■□□□□ 0.88
TPM4-201ENST00000300933 LRRC72A6NJI9 287 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 KIAA0513O60268 411 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 MRPS14O60783 128 aaKnown RBP20.57■□□□□ 0.88
TPM4-201ENST00000300933 ADORA3P0DMS8 318 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 CSNK2A2P19784 350 aaPredicted RBP20.57■□□□□ 0.88
TPM4-201ENST00000300933 AZGP1P25311 298 aaKnown RBP20.57■□□□□ 0.88
TPM4-201ENST00000300933 ELAVL4P26378 380 aaKnown RBP20.57■□□□□ 0.88
TPM4-201ENST00000300933 TBRG1Q3YBR2 411 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 ZNF517Q6ZMY9 492 aaPredicted RBP20.57■□□□□ 0.88
TPM4-201ENST00000300933 ASPGQ86U10 573 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 STX19Q8N4C7 294 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 MYDGFQ969H8 173 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 MS4A12Q9NXJ0 267 aa20.57■□□□□ 0.88
TPM4-201ENST00000300933 WDR87Q6ZQQ6 2873 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms