RNA–Protein interactions for RNA: ENST00000300853.7

ERCC1-202, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC1, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-202ENST00000300853 ADGRF1Q5T601 910 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 ZCCHC12Q6PEW1 402 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 C17orf64Q86WR6 236 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 ADGRG3Q86Y34 549 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 CPOQ8IVL8 374 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 SERPINA12Q8IW75 414 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 TTC9BQ8N6N2 239 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 MNTQ99583 582 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 POLDIP3Q9BY77 421 aaKnown RBP11.22□□□□□ -0.61
ERCC1-202ENST00000300853 DDX31Q9H8H2 851 aaKnown RBP11.22□□□□□ -0.61
ERCC1-202ENST00000300853 BIN3Q9NQY0 253 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 C5AR2Q9P296 337 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 ZNF175Q9Y473 711 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 PRSS44E7EML9 344 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 QSOX1O00391 747 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 TGM6O95932 706 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 C1QCP02747 245 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 RBMS1P29558 406 aaKnown RBP11.22□□□□□ -0.61
ERCC1-202ENST00000300853 SOX18P35713 384 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 RPL4P36578 427 aaKnown RBP11.22□□□□□ -0.61
ERCC1-202ENST00000300853 FLI1Q01543 452 aaPredicted RBP11.22□□□□□ -0.61
ERCC1-202ENST00000300853 ST3GAL3Q11203 375 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 TRAM2Q15035 370 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 PUS10Q3MIT2 529 aaKnown RBP11.22□□□□□ -0.61
ERCC1-202ENST00000300853 PGBD3Q8N328 593 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 MSLNLQ96KJ4 702 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.22□□□□□ -0.61
ERCC1-202ENST00000300853 GMEB2Q9UKD1 530 aa11.22□□□□□ -0.61
ERCC1-202ENST00000300853 GPR171O14626 319 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 KRT33AO76009 404 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 LGI1O95970 557 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 GNSP15586 552 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 ELAVL4P26378 380 aaKnown RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 IGSF11Q5DX21 431 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 HBMQ6B0K9 141 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 GPR139Q6DWJ6 353 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 PLBD1Q6P4A8 553 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 QSOX2Q6ZRP7 698 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 NLRC3Q7RTR2 1065 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 OR8D4Q8NGM9 314 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 OR4C6Q8NH72 309 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 ADAMTS15Q8TE58 950 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 CNOT9Q92600 299 aaKnown RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 LRRC46Q96FV0 321 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 SEC22CQ9BRL7 303 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 ALG8Q9BVK2 526 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 EXO5Q9H790 373 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 PGAP2Q9UHJ9 254 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 ELF5Q9UKW6 265 aaPredicted RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 OR10H1Q9Y4A9 318 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 CNTRLQ7Z7A1 2325 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 A0A0G2JLL6 359 aaPredicted RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 OR6C75A6NL08 312 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 RTCAO00442 366 aaKnown RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 PRAF2O60831 178 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 ZNF821O75541 412 aaPredicted RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 ZP3P21754 424 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 AHCYP23526 432 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 CCR7P32248 378 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 RORAP35398 523 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 RAP2BP61225 183 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 AFMIDQ63HM1 303 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 PRRT2Q7Z6L0 340 aaPredicted RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 TBC1D19Q8N5T2 526 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 LINC01465Q8N7H1 131 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 OR5M3Q8NGP4 307 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 C16orf78Q8WTQ4 265 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 S100A16Q96FQ6 103 aaKnown RBP11.21□□□□□ -0.61
ERCC1-202ENST00000300853 NEUROD4Q9HD90 331 aa11.21□□□□□ -0.61
ERCC1-202ENST00000300853 SLX4Q8IY92 1834 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 SLC9B1P1A6NJY1 282 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 WDPCPO95876 746 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 PAK4O96013 591 aaPredicted RBP11.21□□□□□ -0.62
ERCC1-202ENST00000300853 F2P00734 622 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 IFNGP01579 166 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 ACVR2AP27037 513 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 MGAT3Q09327 533 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 GPR17Q13304 367 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 TMEM220Q6QAJ8 160 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 GSG1LQ6UXU4 331 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 PAQR7Q86WK9 346 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 RBM45Q8IUH3 476 aaKnown RBP11.21□□□□□ -0.62
ERCC1-202ENST00000300853 KLHDC9Q8NEP7 349 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 RADILQ96JH8 1075 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 LINC00597Q9H2U6 94 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 TCF7L1Q9HCS4 588 aa11.21□□□□□ -0.62
ERCC1-202ENST00000300853 AK6Q9Y3D8 172 aaKnown RBP11.21□□□□□ -0.62
ERCC1-202ENST00000300853 F5H0A9 414 aaPredicted RBP11.2□□□□□ -0.62
ERCC1-202ENST00000300853 GTPBP1O00178 669 aaKnown RBP11.2□□□□□ -0.62
ERCC1-202ENST00000300853 FRS3O43559 492 aa11.2□□□□□ -0.62
ERCC1-202ENST00000300853 SNAPC5O75971 98 aa11.2□□□□□ -0.62
ERCC1-202ENST00000300853 LDOC1O95751 146 aaPredicted RBP11.2□□□□□ -0.62
ERCC1-202ENST00000300853 IGLV3-25P01717 112 aa11.2□□□□□ -0.62
ERCC1-202ENST00000300853 APOC1P02654 83 aa11.2□□□□□ -0.62
ERCC1-202ENST00000300853 ZNF30P17039 623 aa11.2□□□□□ -0.62
ERCC1-202ENST00000300853 CXCL3P19876 107 aa11.2□□□□□ -0.62
ERCC1-202ENST00000300853 EDNRAP25101 427 aa11.2□□□□□ -0.62
ERCC1-202ENST00000300853 PTBP1P26599 531 aaKnown RBP eCLIP11.2□□□□□ -0.623e-10■■■■□ 23.3
ERCC1-202ENST00000300853 S100A11P31949 105 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms