RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 INSL4Q14641 139 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 NTRK2Q16620 822 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 LRIT3Q3SXY7 679 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 FLYWCH1Q4VC44 716 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 C18orf63Q68DL7 685 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 TCEAL8Q8IYN2 117 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 OR5M3Q8NGP4 307 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 FOXN4Q96NZ1 517 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 MVB12BQ9H7P6 319 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 SRA1Q9HD15 236 aaKnown RBP12.57□□□□□ -0.4
CASC4-201ENST00000299957 THSD1Q9NS62 852 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 ACER3Q9NUN7 267 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 ZNF69Q9UC07 566 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 PLEKHM1Q9Y4G2 1056 aa12.57□□□□□ -0.4
CASC4-201ENST00000299957 UBE2QL1A1L167 161 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 LYRM1O43325 122 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 ADRB3P13945 408 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 GRK5P34947 590 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 PSMB10P40306 273 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 LSM11P83369 360 aaKnown RBP eCLIP12.56□□□□□ -0.4
CASC4-201ENST00000299957 OC90Q02509 493 aaPredicted RBP12.56□□□□□ -0.4
CASC4-201ENST00000299957 KIAA0040Q15053 153 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 GXYLT1Q4G148 440 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 TP53I3Q53FA7 332 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 LRIF1Q5T3J3 769 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 OR2T33Q8NG76 320 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 HERVK_113Q902F9 699 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 SLIRPQ9GZT3 109 aaKnown RBP12.56□□□□□ -0.4
CASC4-201ENST00000299957 AKIP1Q9NQ31 210 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 SESN1Q9Y6P5 492 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 PRAMEF4O60810 478 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 BMP8BP34820 402 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 TRIM71Q2Q1W2 868 aaKnown RBP12.56□□□□□ -0.4
CASC4-201ENST00000299957 PRAMEF9Q5VWM5 478 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 FAAH2Q6GMR7 532 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 ACSM5Q6NUN0 579 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 BMP8AQ7Z5Y6 402 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 ACBD7Q8N6N7 88 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 CHST4Q8NCG5 386 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 GPR174Q9BXC1 333 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 C1QTNF7Q9BXJ2 289 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 CACNG6Q9BXT2 260 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 BTBD1Q9H0C5 482 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 TRIM36Q9NQ86 728 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 M0R082 166 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 CSO75390 466 aaKnown RBP12.56□□□□□ -0.4
CASC4-201ENST00000299957 HMGN1P05114 100 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 PVRP15151 417 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 GSTM3P21266 225 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 MNDAP41218 407 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 TAS2R38P59533 333 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 GNG2P59768 71 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 BAK1Q16611 211 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 PPP2R2DQ66LE6 453 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 CNKSR3Q6P9H4 555 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 TMPRSS9Q7Z410 1059 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 SLC39A11Q8N1S5 342 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 FANK1Q8TC84 345 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 MSLNLQ96KJ4 702 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 OR2B2Q9GZK3 357 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 GALNT9Q9HCQ5 603 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 SLC7A7Q9UM01 511 aa12.56□□□□□ -0.4
CASC4-201ENST00000299957 TRAV27A0A087WT01 109 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 KMOO15229 486 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 B3GALT2O43825 422 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 PRKNO60260 465 aaPredicted RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 EFCAB14O75071 495 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 NTN1O95631 604 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 CCL5P13501 91 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 MAZP56270 477 aaKnown RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 CLDN12P56749 244 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 PDGFRLQ15198 375 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 OR4C11Q6IEV9 310 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 NOXA1Q86UR1 476 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 ZNF676Q8N7Q3 588 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 PLA2G15Q8NCC3 412 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 C17orf50Q8WW18 174 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 RFT1Q96AA3 541 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 CAMK1GQ96NX5 476 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 KXD1Q9BQD3 176 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 C1QTNF3Q9BXJ4 246 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 TCF7L1Q9HCS4 588 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 ZNF226Q9NYT6 803 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 KCMF1Q9P0J7 381 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 ATAD5Q96QE3 1844 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 MEIS3P1A6NDR6 274 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 FAM47E-STBD1D6RA91 191 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 GATBO75879 557 aaKnown RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 ARAFP10398 606 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 DDCP20711 480 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 CRYZQ08257 329 aaKnown RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 SQSTM1Q13501 440 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 HES5Q5TA89 166 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 FAM205BPQ63HN1 556 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 C8orf82Q6P1X6 216 aaPredicted RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 BOLLQ8N9W6 283 aaKnown RBP12.55□□□□□ -0.4
CASC4-201ENST00000299957 SLC25A18Q9H1K4 315 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 CDCP1Q9H5V8 836 aa12.55□□□□□ -0.4
CASC4-201ENST00000299957 TXNL4BQ9NX01 149 aaKnown RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms