RNA–Protein interactions for RNA: ENST00000298260.8

SKA3-201, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 2,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-201ENST00000298260 OCLNQ16625 522 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 FAM110CQ1W6H9 321 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 TMEM255AQ5JRV8 349 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 MZT2AQ6P582 158 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 NCEH1Q6PIU2 408 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 C3P1Q6ZMU1 363 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 LRRC70Q7Z2Q7 622 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 ZNF280BQ86YH2 543 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 TOMM5Q8N4H5 51 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 CHCHD4Q8N4Q1 142 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 FAM26EQ8N5C1 309 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 LILRA3Q8N6C8 439 aaPredicted RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 HORMAD2Q8N7B1 307 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 PLA2G15Q8NCC3 412 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 SLC38A5Q8WUX1 472 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 THAP4Q8WY91 577 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 C12orf57Q99622 126 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 UQCC2Q9BRT2 126 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 DPH7Q9BTV6 452 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 KLHL1Q9NR64 748 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 TAS2R7Q9NYW3 318 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 PLXND1Q9Y4D7 1925 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 ANXA2P2A6NMY6 339 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 SH3BP5O60239 455 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 KLKB1P03952 638 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 H2AFB2P0C5Z0 115 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 SULT1A3P0DMM9 295 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 SULT1A4P0DMN0 295 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 SLC1A3P43003 542 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 PSEN2P49810 448 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 PCBP3P57721 371 aaKnown RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 GPR85P60893 370 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 CDC42EP1Q00587 391 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 E2F1Q01094 437 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 RGS7BPQ6MZT1 257 aaPredicted RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 FAAP20Q6NZ36 180 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 METAP1DQ6UB28 335 aaPredicted RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 FAM198BQ6UWH4 519 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 SZRD1Q7Z422 152 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 ZNF436Q9C0F3 470 aaPredicted RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 ABCG4Q9H172 646 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 AUNIPQ9H7T9 357 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 CNIH4Q9P003 139 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 KCND3Q9UK17 655 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 MTMR11A4FU01 709 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 TMEM202A6NGA9 273 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 FAM183AA6NL82 134 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 A8MVJ9 347 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 SLC2A10O95528 541 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 DRD2P14416 443 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 RPL9P32969 192 aaKnown RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 PITPNBP48739 271 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 DEFA5Q01523 94 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 GGTA1PQ4G0N0 100 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 EOGTQ5NDL2 527 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 CD200R1LQ6Q8B3 271 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 PAQR7Q86WK9 346 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 HS6ST3Q8IZP7 471 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 NXPE1Q8N323 547 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 OR4K5Q8NGD3 323 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 OR5M3Q8NGP4 307 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 BBS10Q8TAM1 723 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 ATOH1Q92858 354 aaPredicted RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 HGDQ93099 445 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 CYSLTR2Q9NS75 346 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 MRPL39Q9NYK5 338 aaKnown RBP12.7□□□□□ -0.38
SKA3-201ENST00000298260 POMT2Q9UKY4 750 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 CORO2BQ9UQ03 480 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 CHST2Q9Y4C5 530 aa12.7□□□□□ -0.38
SKA3-201ENST00000298260 ANKDD1BA6NHY2 528 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 M0QZQ0 153 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 GMDSO60547 372 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 EGFP01133 1207 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 HOXB3P14651 431 aaPredicted RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 PPIBP23284 216 aaKnown RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 ATP6V1E1P36543 226 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 DGKGP49619 791 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 MAZP56270 477 aaKnown RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 TAS2R50P59544 299 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 ELOAQ14241 798 aaKnown RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 ANXA8L1Q5VT79 327 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 NHLRC1Q6VVB1 395 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 HDDC2Q7Z4H3 204 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 RELL2Q8NC24 303 aaPredicted RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 APOBEC4Q8WW27 367 aaKnown RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 ASB11Q8WXH4 323 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 TMEM19Q96HH6 336 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 FCRL1Q96LA6 429 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 ERMAPQ96PL5 475 aaPredicted RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 SLC38A2Q96QD8 506 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 OR2M2Q96R28 347 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 SLC6A17Q9H1V8 727 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 OR10A4Q9H209 315 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 SERHL2Q9H4I8 314 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 ZNF768Q9H5H4 540 aaKnown RBP12.69□□□□□ -0.38
SKA3-201ENST00000298260 LDAHQ9H6V9 325 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 SCP2D1Q9UJQ7 156 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 TFP02787 698 aa12.69□□□□□ -0.38
SKA3-201ENST00000298260 GLAP06280 429 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms