RNA–Protein interactions for RNA: ENST00000296302.11

PBRM1-201, Transcript of polybromo 1, humanhuman

TSL 1 (best) BASIC

Gene PBRM1, Length 5,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-201ENST00000296302 OR2T4Q8NH00 348 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 TCEAL3Q969E4 200 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 PCDHA9Q9Y5H5 950 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 LOC102723532A0A0G2JNH3 316 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 GPR89AB7ZAQ6 455 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 LEFTY1O75610 366 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 RAD51DO75771 328 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CD3GP09693 182 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 GPR89BP0CG08 455 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ERVK-25P63136 954 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 HES5Q5TA89 166 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF529Q6P280 563 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 KCTD20Q7Z5Y7 419 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CLEC14AQ86T13 490 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CPOQ8IVL8 374 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 TMEM234Q8WY98 164 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 TREX2Q9BQ50 279 aaPredicted RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CLMPQ9H6B4 373 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 SRA1Q9HD15 236 aaKnown RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 RANGRFQ9HD47 186 aaPredicted RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 LRRC37A3O60309 1634 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 TRAV18A0A075B6X5 111 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 LEFTY2O00292 366 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ARPC1BO15143 372 aaKnown RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CASC3O15234 703 aaKnown RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 GABARAPO95166 117 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 TNFP01375 233 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 PRSS56P0CW18 603 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CHRNB1P11230 501 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 AKR1C4P17516 323 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ELOAQ14241 798 aaKnown RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 AMZ1Q400G9 498 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CATSPEREQ5SY80 951 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 LACC1Q8IV20 430 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF283Q8N7M2 679 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 C16orf70Q9BSU1 422 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ARNT2Q9HBZ2 717 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF334Q9HCZ1 680 aaPredicted RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF701Q9NV72 531 aaPredicted RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 MAFFQ9ULX9 164 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 A3GALT2U3KPV4 340 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 MYH11P35749 1972 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 SSX5O60225 188 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 GJB5O95377 273 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CYP17A1P05093 508 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 CBLP22681 906 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 GABRB3P28472 473 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 PRDX3P30048 256 aaKnown RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 MAGEA3P43357 314 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 LMAN2Q12907 356 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 STEAP3Q658P3 488 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF551Q7Z340 670 aaPredicted RBP10.47□□□□□ -0.73
PBRM1-201ENST00000296302 TMEM185AQ8NFB2 350 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 OR5AK2Q8NH90 309 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ADAMTS14Q8WXS8 1223 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 TXNDC15Q96J42 360 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 ATOH8Q96SQ7 321 aa10.47□□□□□ -0.73
PBRM1-201ENST00000296302 HPGDSO60760 199 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 TSPAN15O95858 294 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 MAOAP21397 527 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 CD6P30203 668 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 GNRHRP30968 328 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 MMP12P39900 470 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 HSD11B2P80365 405 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 ZXDBP98169 803 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 ZNF776Q68DI1 518 aaPredicted RBP10.46□□□□□ -0.73
PBRM1-201ENST00000296302 HMGN2P46Q86SG4 172 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 OR4K17Q8NGC6 315 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 SAMD8Q96LT4 415 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 FN3KQ9H479 309 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 TXNRD2Q9NNW7 524 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 ASB6Q9NWX5 421 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 HYKKA2RU49 373 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 TNFRSF10BO14763 440 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 PRAMEF2O60811 474 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 SMIM18P0DKX4 95 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 CDK2P24941 298 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 CERS1P27544 350 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 CTSOP43234 321 aaPredicted RBP10.46□□□□□ -0.73
PBRM1-201ENST00000296302 PIN1Q13526 163 aaPredicted RBP10.46□□□□□ -0.73
PBRM1-201ENST00000296302 ARL6IP1Q15041 203 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 CHADLQ6NUI6 762 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 DPY19L2P1Q6NXN4 242 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 RETREG3Q86VR2 466 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 DNAJC22Q8N4W6 341 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 SLAIN1Q8ND83 568 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 RPL3LQ92901 407 aaKnown RBP10.46□□□□□ -0.73
PBRM1-201ENST00000296302 POLMQ9NP87 494 aaPredicted RBP10.46□□□□□ -0.73
PBRM1-201ENST00000296302 WASF3Q9UPY6 502 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 SPO11Q9Y5K1 396 aa10.46□□□□□ -0.73
PBRM1-201ENST00000296302 MUSKO15146 869 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 ZNF623O75123 536 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 GJA1P17302 382 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 DLSTP36957 453 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 RAP2BP61225 183 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 DHCR24Q15392 516 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 FAM122CQ6P4D5 195 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 NRSN1Q8IZ57 195 aa10.46□□□□□ -0.74
PBRM1-201ENST00000296302 CBARPQ8N350 705 aaPredicted RBP10.46□□□□□ -0.74
PBRM1-201ENST00000296302 BOCQ9BWV1 1114 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms