RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 DOC2BQ14184 412 aa18.73■□□□□ 0.59
CXCL16-201ENST00000293778 GJD3Q8N144 294 aa18.73■□□□□ 0.59
CXCL16-201ENST00000293778 FAM26EQ8N5C1 309 aa18.73■□□□□ 0.59
CXCL16-201ENST00000293778 MROQ9BYG7 248 aa18.73■□□□□ 0.59
CXCL16-201ENST00000293778 TRIM45Q9H8W5 580 aaPredicted RBP18.73■□□□□ 0.59
CXCL16-201ENST00000293778 CCDC59Q9P031 241 aaKnown RBP18.73■□□□□ 0.59
CXCL16-201ENST00000293778 NTMQ9P121 344 aa18.73■□□□□ 0.59
CXCL16-201ENST00000293778 SCN3AQ9NY46 2000 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CPSF4LA6NMK7 179 aaKnown RBP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 FCMRO60667 390 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 TLX1P31314 330 aaPredicted RBP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 PRKAR1BP31321 381 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CDK5Q00535 292 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 ILF3Q12906 894 aaKnown RBP eCLIP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 TRAM2Q15035 370 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 OXA1LQ15070 435 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 TBC1D25Q3MII6 688 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 EOGTQ5NDL2 527 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 HEPHL1Q6MZM0 1159 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 NIPAL1Q6NVV3 410 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 ATCAYQ86WG3 371 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 OR4N5Q8IXE1 308 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CACTIN-AS1Q8N1I8 211 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CAMKVQ8NCB2 501 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 SLC16A11Q8NCK7 471 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 OPALINQ96PE5 141 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 C6orf62Q9GZU0 229 aaPredicted RBP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 KLHL28Q9NXS3 571 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 PILRAQ9UKJ1 303 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 DAPP1Q9UN19 280 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 LSM2Q9Y333 95 aaKnown RBP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CHST2Q9Y4C5 530 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 FUOMA2VDF0 154 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 DNAJB6O75190 326 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 ZIC2O95409 532 aaPredicted RBP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CKMT1AP12532 417 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 IFNGR2P38484 337 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 AVPR1BP47901 424 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 SSX1Q16384 188 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 ACSM5Q6NUN0 579 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CDC73Q6P1J9 531 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 Q6ZSR6 202 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 OR52P1PQ8NH57 321 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 GNPDA2Q8TDQ7 276 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 DIO2Q92813 273 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CDS1Q92903 461 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 TAPBPLQ9BX59 468 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 NXF2Q9GZY0 626 aaKnown RBP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 POLMQ9NP87 494 aaPredicted RBP18.72■□□□□ 0.59
CXCL16-201ENST00000293778 SEMA4GQ9NTN9 838 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 CLEC2DQ9UHP7 191 aa18.72■□□□□ 0.59
CXCL16-201ENST00000293778 LOC105369274A0A096LPK9 316 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 LOC102723532A0A0G2JNH3 316 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 FAM170BA6NMN3 283 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 AGR2O95994 175 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 SCG5P05408 212 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 CCNYL3P0C7X3 344 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 ZNF10P21506 573 aaPredicted RBP18.71■□□□□ 0.59
CXCL16-201ENST00000293778 SMSP52788 366 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 COL9A2Q14055 689 aaPredicted RBP18.71■□□□□ 0.59
CXCL16-201ENST00000293778 SLC25A30Q5SVS4 291 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 ABHD13Q7L211 337 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 MEX3DQ86XN8 651 aaKnown RBP18.71■□□□□ 0.59
CXCL16-201ENST00000293778 KIF18BQ86Y91 864 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 OR4N4Q8N0Y3 316 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 SLC9A6Q92581 669 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 CDADC1Q9BWV3 514 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 C8orf33Q9H7E9 229 aaPredicted RBP18.71■□□□□ 0.59
CXCL16-201ENST00000293778 XIRP2A4UGR9 3374 aa18.71■□□□□ 0.59
CXCL16-201ENST00000293778 CSO75390 466 aaKnown RBP18.7■□□□□ 0.58
CXCL16-201ENST00000293778 GABRG2P18507 467 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 IFNA8P32881 189 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 BCAP31P51572 246 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 PPP5CP53041 499 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 RPS3AP61247 264 aaKnown RBP18.7■□□□□ 0.58
CXCL16-201ENST00000293778 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.7■□□□□ 0.58
CXCL16-201ENST00000293778 ST3GAL3Q11203 375 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 SPHARQ15513 63 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 SYT14P1Q58G82 188 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 ZNF730Q6ZMV8 503 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 OR2L13Q8N349 312 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 CLIP4Q8N3C7 705 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 PATE1Q8WXA2 126 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 LRR1Q96L50 414 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 ZFYVE21Q9BQ24 234 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 MND1Q9BWT6 205 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 PLA2G12AQ9BZM1 189 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 EGLN3Q9H6Z9 239 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 MKLN1Q9UL63 735 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 SLC22A7Q9Y694 548 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 TTC36A6NLP5 189 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 KIAA0513O60268 411 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 TRHRP34981 398 aaPredicted RBP18.7■□□□□ 0.58
CXCL16-201ENST00000293778 RGS8P57771 180 aaPredicted RBP18.7■□□□□ 0.58
CXCL16-201ENST00000293778 SNAPC1Q16533 368 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 RNLSQ5VYX0 342 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 FRRS1Q6ZNA5 592 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 USP53Q70EK8 1073 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 PRICKLE2Q7Z3G6 844 aa18.7■□□□□ 0.58
CXCL16-201ENST00000293778 SIMC1Q8NDZ2 872 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms