RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 FBXL3Q9UKT7 428 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMEM14AQ9Y6G1 99 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 CEPT1Q9Y6K0 416 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 CAPN14A8MX76 684 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 SOCS5O75159 536 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 RGS9O75916 674 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ADH6P28332 368 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 PYCR1P32322 319 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 CA5AP35218 305 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACTR1BP42025 376 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 PRKXP51817 358 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACTR1AP61163 376 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 CDK5R2Q13319 367 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 HNRNPA1L2Q32P51 320 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 COMMD7Q86VX2 200 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 TOR1AIP2Q8NFQ8 470 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR2T35Q8NGX2 323 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 FBXO27Q8NI29 283 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 UTP4Q969X6 686 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 CLDN23Q96B33 292 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 MRGPRX2Q96LB1 330 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 MEN1O00255 615 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC33A1O00400 549 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC31A1O15431 190 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 IFNA2P01563 188 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 FDXRP22570 491 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 FRKP42685 505 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 GCGRP47871 477 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 HERV-K104P61576 105 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 CHAF1BQ13112 559 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 KEAP1Q14145 624 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 CES4AQ5XG92 561 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ENPP6Q6UWR7 440 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR56A3Q8NH54 315 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.23□□□□□ -0.612e-6■■■□□ 17.6
SYNGAP1-201ENST00000293748 GPN2Q9H9Y4 310 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 GPR83Q9NYM4 423 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 GRHPRQ9UBQ7 328 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 AHSA1O95433 338 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 PLATP00750 562 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 GBAP04062 536 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 MPC1LP0DKB6 136 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 S1PR1P21453 382 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 SOX2P48431 317 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACTA2P62736 377 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACTG2P63267 376 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 GAS6Q14393 721 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 PCBP2Q15366 365 aaKnown RBP eCLIP11.23□□□□□ -0.612e-7■■■■■ 41.9
SYNGAP1-201ENST00000293748 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF550Q7Z398 422 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 MAPK15Q8TD08 544 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 DGAT2Q96PD7 388 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 SAV1Q9H4B6 383 aaPredicted RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 G3V2L1 256 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 SMAD9O15198 467 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 HCKP08631 526 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC6A9P48067 706 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 NFATC2Q13469 925 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 PTPRCAPQ14761 206 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 DESI1Q6ICB0 168 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR8S1Q8NH09 359 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR2S2Q9NQN1 319 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 IL36AQ9UHA7 158 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 NUFIP1Q9UHK0 495 aaKnown RBP11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 PCDHGA2Q9Y5H1 932 aa11.23□□□□□ -0.61
SYNGAP1-201ENST00000293748 A0A1W2PQL4 384 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 WASH4PA8MWX3 477 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 NPIPA5E9PKD4 350 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 GSRP00390 522 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 PDYNP01213 254 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 HLA-EP13747 358 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 JUPP14923 745 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 C5AR1P21730 350 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 MTNR1AP48039 350 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 BLKP51451 505 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SNRPD2P62316 118 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 DECR1Q16698 335 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 ARSKQ6UWY0 536 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR8K5Q8NH50 307 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 COQ10AQ96MF6 247 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC38A3Q99624 504 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 ANKMY1Q9P2S6 941 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 INTS6Q9UL03 887 aaKnown RBP11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 NPIPA1Q9UND3 350 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 A0A1B0GVT2 93 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF705EA8MWA4 302 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 PPM1BO75688 479 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SOX30O94993 753 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 PDGFBP01127 241 aaPredicted RBP11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 UCHL1P09936 223 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 ALPPL2P10696 532 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 CAPN3P20807 821 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 PRKACBP22694 351 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 CAPZA1P52907 286 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 AGAP6Q5VW22 663 aa11.22□□□□□ -0.61
SYNGAP1-201ENST00000293748 SPARTQ8N0X7 666 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms