RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 CTU2Q2VPK5 515 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZNF691Q5VV52 312 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PODNL1Q6PEZ8 512 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CEACAM19Q7Z692 300 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PDZD3Q86UT5 571 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 JAGN1Q8N5M9 183 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 OR9A4Q8NGU2 314 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC38A5Q8WUX1 472 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 RAB11FIP5Q9BXF6 653 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PRRG4Q9BZD6 226 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 NAALAD2Q9Y3Q0 740 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PSME4Q14997 1843 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 DNAJC13O75165 2243 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 TRAPPC6AO75865 159 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SEMA4FO95754 770 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 FUCA1P04066 466 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SPARCP09486 303 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 FAM111BQ6SJ93 734 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC30A8Q8IWU4 369 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 NSMAFQ92636 917 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 UCN3Q969E3 161 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CPPED1Q9BRF8 314 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 P2RY12Q9H244 342 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 DSN1Q9H410 356 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PRSS16Q9NQE7 514 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 NECTIN3Q9NQS3 549 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 TBCCD1Q9NVR7 557 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZNF69Q9UC07 566 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CLEC2DQ9UHP7 191 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 GPR34Q9UPC5 381 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 MAN2B2Q9Y2E5 1009 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 LINC01553A4QN01 128 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 C2orf74A8MZ97 194 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 YY2O15391 372 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 EMC8O43402 210 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 EGFP01133 1207 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 HSD17B2P37059 387 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ALDH3B2P48448 385 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 MAZP56270 477 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 PHC1P78364 1004 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CTBSQ01459 385 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CHRNEQ04844 493 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 LRRC37A5PQ49AS3 106 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZNF385BQ569K4 471 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CPOQ8IVL8 374 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 RNASE11Q8TAA1 199 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 C1orf216Q8TAB5 229 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 FAM174AQ8TBP5 190 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SPPL3Q8TCT6 385 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SETD7Q8WTS6 366 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 TOE1Q96GM8 510 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC41A3Q96GZ6 507 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 ZNF300Q96RE9 604 aaPredicted RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 PKMYT1Q99640 499 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CPEB1Q9BZB8 566 aaKnown RBP4.52□□□□□ -1.69
UBR1-201ENST00000290650 SLC25A18Q9H1K4 315 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 SMURF1Q9HCE7 757 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 HS3ST2Q9Y278 367 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 CFL2Q9Y281 166 aa4.52□□□□□ -1.69
UBR1-201ENST00000290650 PRSS38A1L453 326 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SLC9B1P1A6NJY1 282 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 HK1P19367 917 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 DDCP20711 480 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 C5AR1P21730 350 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR1D4P47884 311 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 GBX2P52951 348 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 TMBIM6P55061 237 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 B4GALNT1Q00973 533 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 RBBP4Q09028 425 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TBRG1Q3YBR2 411 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TP53I3Q53FA7 332 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 EOGTQ5NDL2 527 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 AFMIDQ63HM1 303 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ZNF544Q6NX49 715 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ADIPOR2Q86V24 386 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SYT14Q8NB59 555 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OR2L2Q8NH16 312 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 GNPDA2Q8TDQ7 276 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ZDHHC1Q8WTX9 485 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TNFAIP8L1Q8WVP5 186 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 FCGR1BQ92637 280 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 OSTF1Q92882 214 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 PDXPQ96GD0 296 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MAELQ96JY0 434 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 HSPA12BQ96MM6 686 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 WDR77Q9BQA1 342 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 CENPOQ9BU64 300 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SPNS1Q9H2V7 528 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 FN3KQ9H479 309 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 VNN3Q9NY84 501 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 EXTL2Q9UBQ6 330 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 YARS2Q9Y2Z4 477 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 A0A1W2PQL4 384 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 ASPDHA6ND91 283 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 POM121BA6NF01 834 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TARM1B6A8C7 271 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 NPPBP16860 134 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CEBPGP53567 150 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MAD2L1BPQ15013 274 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 TMC8Q8IU68 726 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms