RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 RUNDC3AQ59EK9 446 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 PAGE3Q5JUK9 113 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 INTS11Q5TA45 600 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 SAXO2Q658L1 398 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC2A7Q6PXP3 512 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 ZBTB49Q6ZSB9 765 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 NET1Q7Z628 596 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC30A8Q8IWU4 369 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 COX18Q8N8Q8 333 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 RBM15BQ8NDT2 890 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 OR56A1Q8NGH5 318 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 CGREF1Q99674 301 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 NRSN2Q9GZP1 204 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 CIB4A0PJX0 185 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 KPNA4O00629 521 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 TIAF1O95411 115 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 KRT75O95678 551 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 PTNP21246 168 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 XCR1P46094 333 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 NOVA1P51513 510 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 EEFSECP57772 596 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 ZNF628Q5EBL2 1059 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 OR5T3Q8NGG3 340 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 ZHX1-C8orf76Q96EF9 292 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 PTCHD1Q96NR3 888 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 NPAS2Q99743 824 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 CPPED1Q9BRF8 314 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 ULBP3Q9BZM4 244 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 METTL7AQ9H8H3 244 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 IFT80Q9P2H3 777 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 RAPGEFL1Q9UHV5 662 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 VSTM5A8MXK1 200 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 XKRYO14609 159 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 GUSBP08236 651 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 C8orf89P0DMQ9 161 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 CCL4P13236 92 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC6A2P23975 617 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 PSMB9P28065 219 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 MSX2P35548 267 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 DNASE1L1P49184 302 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 DGKQP52824 942 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 RSPO4Q2I0M5 234 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 EXOSC6Q5RKV6 272 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 FAM198BQ6UWH4 519 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 FAM98AQ8NCA5 519 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 OR7G1Q8NGA0 311 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 CCNL2Q96S94 520 aaPredicted RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 EPS8L2Q9H6S3 715 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 ZCCHC3Q9NUD5 404 aaKnown RBP7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 SATB2Q9UPW6 733 aa7.88□□□□□ -1.15
PTPDC1-201ENST00000288976 SPAARA0A1B0GVQ0 90 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 C21orf140B9A014 251 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PGRMC2O15173 223 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PSMG1O95456 288 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 IL7RP16871 459 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 NCBP2P52298 156 aaKnown RBP eCLIP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PSME3P61289 254 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FADDQ13158 208 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 DGCR6Q14129 220 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FXNQ16595 210 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FAM98BQ52LJ0 330 aaKnown RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC25A24Q6NUK1 477 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 TNFAIP8L2Q6P589 184 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CIDECQ96AQ7 238 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 NEURL3Q96EH8 262 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CNRIP1Q96F85 164 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PEX11GQ96HA9 241 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CDRT15Q96T59 188 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 DEFB126Q9BYW3 111 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 GLIPR2Q9H4G4 154 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 REEP1Q9H902 201 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SEC61A2Q9H9S3 476 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 APMAPQ9HDC9 416 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ABCA2Q9BZC7 2435 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ESPL1Q14674 2120 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 TCRBV16S1A1N1A0A5B0 115 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 CDRT15L2A8MXV6 281 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FXYD1O00168 92 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 PGM3O95394 542 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ETV5P41161 510 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 NRG3P56975 720 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 OLR1P78380 273 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FOLH1Q04609 750 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 MAP4K2Q12851 820 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 TOP3AQ13472 1001 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 WLSQ5T9L3 541 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FHL5Q5TD97 284 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ZCCHC12Q6PEW1 402 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 C11orf88Q6PI97 169 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SERPINA11Q86U17 422 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 MMP21Q8N119 569 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 OR2L13Q8N349 312 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 OR14A16Q8NHC5 309 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 ZFP90Q8TF47 636 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 HOXB13Q92826 284 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 FNDC11Q9BVV2 318 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 SIRT3Q9NTG7 399 aaPredicted RBP7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 TAS2R1Q9NYW7 299 aa7.87□□□□□ -1.15
PTPDC1-201ENST00000288976 DHCR7Q9UBM7 475 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms