RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 TMEM41AQ96HV5 264 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 METTL2AQ96IZ6 378 aaKnown RBP13.19□□□□□ -0.3
HMGN3-201ENST00000275036 AMDHD1Q96NU7 426 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 ENKD1Q9H0I2 346 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 GALNT9Q9HCQ5 603 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 MIEF1Q9NQG6 463 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 GIMAP2Q9UG22 337 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 ACAD8Q9UKU7 415 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 C15orf41Q9Y2V0 281 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 WBP11Q9Y2W2 641 aaKnown RBP13.19□□□□□ -0.3
HMGN3-201ENST00000275036 TRAF6Q9Y4K3 522 aa13.19□□□□□ -0.3
HMGN3-201ENST00000275036 FAM90A27PA6NNH2 459 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 KDM4EB2RXH2 506 aaPredicted RBP13.18□□□□□ -0.3
HMGN3-201ENST00000275036 GNB5O14775 395 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 PIP5K1BO14986 540 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 TSPAN2O60636 221 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 ICOSLGO75144 302 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 ERN1O75460 977 aaKnown RBP13.18□□□□□ -0.3
HMGN3-201ENST00000275036 TOXO94900 526 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 PSMG1O95456 288 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 BPGMP07738 259 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 GLI4P10075 376 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 NEFHP12036 1026 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 IGFBP2P18065 325 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 ACVR2AP27037 513 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 PTPN6P29350 595 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 ADH7P40394 386 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 MASP1P48740 699 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 RPL38P63173 70 aaKnown RBP13.18□□□□□ -0.3
HMGN3-201ENST00000275036 RPP38P78345 283 aaKnown RBP13.18□□□□□ -0.3
HMGN3-201ENST00000275036 SH2D4BQ5SQS7 431 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 TMEM211Q6ICI0 200 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 TMEM107Q6UX40 140 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 GDF7Q7Z4P5 450 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 PACS2Q86VP3 889 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 CLYBLQ8N0X4 340 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 OR4N2Q8NGD1 307 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 CLHC1Q8NHS4 586 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 RND1Q92730 232 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 SARAFQ96BY9 339 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 TSSK3Q96PN8 268 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 CCT7Q99832 543 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 TTYH2Q9BSA4 534 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 EXO5Q9H790 373 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 METTL7AQ9H8H3 244 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 SENP1Q9P0U3 644 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 B4GALT7Q9UBV7 327 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 BAIAP2L1Q9UHR4 511 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 ZDHHC2Q9UIJ5 367 aa13.18□□□□□ -0.3
HMGN3-201ENST00000275036 A0A087WV62 115 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 A0A0G2JNJ9 132 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 OR6C70A6NIJ9 312 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 B4DXG7 233 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 UPK1AO00322 258 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 PLOD2O00469 737 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 AKAP10O43572 662 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 REM1O75628 298 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 CHEK2O96017 543 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 HPNP05981 417 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 CHRNB4P30926 498 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 NTSP30990 170 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 CDK9P50750 372 aaKnown RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 PSG6Q00889 435 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 GALNTL6Q49A17 601 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 XKR7Q5GH72 579 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 TNFAIP8L3Q5GJ75 292 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 TIGD3Q6B0B8 471 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 ANGPTL8Q6UXH0 198 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 SEM1Q6ZVN7 128 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 ZNF551Q7Z340 670 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 WDR53Q7Z5U6 358 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 EXOC3L1Q86VI1 746 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 MED12LQ86YW9 2145 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 LIX1LQ8IVB5 337 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 SLC44A2Q8IWA5 706 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 DDIASQ8IXT1 998 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 WDSUB1Q8N9V3 476 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 LILRB4Q8NHJ6 448 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 CIDECQ96AQ7 238 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 SLC35A4Q96G79 324 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 PKNOX2Q96KN3 472 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 LURAP1Q96LR2 239 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 C3orf30Q96M34 536 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 COL21A1Q96P44 957 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 ZIM3Q96PE6 472 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 ADOQ96SZ5 270 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 SPOCK3Q9BQ16 436 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 OSBPL11Q9BXB4 747 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 STMN4Q9H169 189 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 EML4Q9HC35 981 aaKnown RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 TAS2R9Q9NYW1 312 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 Q9UFV3 132 aa13.17□□□□□ -0.3
HMGN3-201ENST00000275036 C19orf53Q9UNZ5 99 aaPredicted RBP13.17□□□□□ -0.3
HMGN3-201ENST00000275036 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
HMGN3-201ENST00000275036 FIGNL2A6NMB9 653 aa13.16□□□□□ -0.3
HMGN3-201ENST00000275036 C17orf51A8MQB3 221 aa13.16□□□□□ -0.3
HMGN3-201ENST00000275036 SNPHO15079 494 aa13.16□□□□□ -0.3
HMGN3-201ENST00000275036 RGS16O15492 202 aaPredicted RBP13.16□□□□□ -0.3
HMGN3-201ENST00000275036 TRAPPC6AO75865 159 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms