RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SIAH3Q8IW03 269 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LAS2Q8IYD9 372 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SELENOMQ8WWX9 145 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 NTAN1Q96AB6 310 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LCORQ96JN0 433 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 CDK15Q96Q40 435 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 UBL7Q96S82 380 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 BCO2Q9BYV7 579 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 POLR3FQ9H1D9 316 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PIGMQ9H3S5 423 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 MTG2Q9H4K7 406 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 FLVCR2Q9UPI3 526 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PCNTO95613 3336 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TNFRSF11BO00300 401 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 STK25O00506 426 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 DPM1O60762 260 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 DGAT1O75907 488 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SOD1P00441 154 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 HIST1H2ABP04908 130 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 GIPP09681 153 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 AGAP20933 346 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 AKAP5P24588 427 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 DDTP30046 118 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SDHAP31040 664 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 AGTR2P50052 363 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 NUTF2P61970 127 aaKnown RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 ABHD18Q0P651 414 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 MBTPS1Q14703 1052 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 C10orf91Q5T1B1 145 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 THEM4Q5T1C6 240 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LIPJQ5W064 366 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TCEAL6Q6IPX3 200 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 QSOX2Q6ZRP7 698 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 HIST3H2AQ7L7L0 130 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TAC4Q86UU9 113 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LAPTM4BQ86VI4 370 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 UNC93AQ86WB7 457 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TOMM5Q8N4H5 51 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF561Q8N587 486 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PPHLN1Q8NEY8 458 aaKnown RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 GNPDA2Q8TDQ7 276 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 HIST1H2ACQ93077 130 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 ESAMQ96AP7 390 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TPD52L3Q96J77 140 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 OR52E6Q96RD3 313 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 FZD3Q9NPG1 666 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 CYSLTR2Q9NS75 346 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 DZANK1Q9NVP4 752 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 C2orf42Q9NWW7 574 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TEX10Q9NXF1 929 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TRIP11Q15643 1979 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LCTP09848 1927 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 OR2M5A3KFT3 312 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 HMSDA8MTL9 139 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 H0YCG3 227 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 I6L893 689 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LCP1P13796 627 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 LAG3P18627 525 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 CNR2P34972 360 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 RAP2BP61225 183 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 MAJINQ3KP22 176 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 XKR3Q5GH77 459 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 MBOAT1Q6ZNC8 495 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 CBLL1Q75N03 491 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SSX6Q7RTT6 188 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 FBXO39Q8N4B4 442 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 KRTCAP2Q8N6L1 136 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 MCPH1Q8NEM0 835 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 OR9A2Q8NGT5 310 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 OR6X1Q8NH79 312 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 HASPINQ8TF76 798 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 CLEC4CQ8WTT0 213 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PIH1D2Q8WWB5 315 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 NAA11Q9BSU3 229 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 TEX12Q9BXU0 123 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 NFKBIZQ9BYH8 718 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 SPATC1LQ9H0A9 340 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF629Q9UEG4 869 aaPredicted RBP8.7□□□□□ -1.02
PDGFC-201ENST00000274071 FBXL21Q9UKT6 434 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 FZD10Q9ULW2 581 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 PRKAB1Q9Y478 270 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 MMACHCQ9Y4U1 282 aa8.7□□□□□ -1.02
PDGFC-201ENST00000274071 A0A087X0M5 115 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 A0A1B0GX30 115 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 C2orf78A6NCI8 922 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 PRR23D1E9PI22 279 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 WNT9AO14904 365 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 OR2A4O95047 310 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 FGF19O95750 216 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 JCHAINP01591 159 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 PIGRP01833 764 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 CD3GP09693 182 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 PRR23D2P0DMB1 279 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 ANXA8P13928 327 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 FGF9P31371 208 aaPredicted RBP8.69□□□□□ -1.02
PDGFC-201ENST00000274071 PITPNBP48739 271 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 HTR6P50406 440 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 E2F1Q01094 437 aa8.69□□□□□ -1.02
PDGFC-201ENST00000274071 ZNF667Q5HYK9 610 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms