RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 COQ8BQ96D53 544 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 ELP4Q96EB1 424 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 DNAJC27Q9NZQ0 273 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 TMEM5Q9Y2B1 443 aa13.58□□□□□ -0.24
PDLIM2-201ENST00000265810 HPRP00739 348 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 CD1CP29017 333 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 MLLT10P55197 1068 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 OR9Q2Q8NGE9 314 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 NEURL3Q96EH8 262 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC25A37Q9NYZ2 338 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 RIMS3Q9UJD0 308 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 ABCG2Q9UNQ0 655 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 A8MVJ9 347 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 H0YAE9 185 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 PRR35P0CG20 571 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 ZP2Q05996 745 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 KLHL22Q53GT1 634 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 OLIG3Q7RTU3 272 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 AMER2Q8N7J2 671 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 CNIH3Q8TBE1 160 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC22A8Q8TCC7 542 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 DIO2Q92813 273 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 OR2A14Q96R47 310 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 SLITRK2Q9H156 845 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 TPK1Q9H3S4 243 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 POMT2Q9UKY4 750 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 GPR4P46093 362 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 CRYZQ08257 329 aaKnown RBP13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 ALG10BQ5I7T1 473 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 LRIF1Q5T3J3 769 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 MOSPD2Q8NHP6 518 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 IFI44Q8TCB0 444 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 FAM118AQ9NWS6 357 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 VILLO15195 856 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 XPNPEP2O43895 674 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 BRINP1O60477 761 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 CTNSO60931 367 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 EML2O95834 649 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 CD1EP15812 388 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 ZNF3P17036 446 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 NXPH1P58417 271 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 PLGLB1Q02325 96 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 IPCEF1Q8WWN9 437 aaPredicted RBP13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 TMEM234Q8WY98 164 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 OSTF1Q92882 214 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 PINK1Q9BXM7 581 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 PPP4R1LQ9P1A2 415 aa13.57□□□□□ -0.24
PDLIM2-201ENST00000265810 IGHV4-34P06331 123 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 FOLR3P41439 243 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 DCDP81605 110 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 SIGLEC14Q08ET2 396 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 SGCBQ16585 318 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 FNDC1Q4ZHG4 1894 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 KCNE1BA0A087WTH5 132 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 BLACEA4D250 179 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 KRBA1A5PL33 1030 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 FXYD1O00168 92 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 TALDO1P37837 337 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 IL18R1Q13478 541 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 NRMQ8IXM6 262 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC16A11Q8NCK7 471 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC41A3Q96GZ6 507 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 YTHDF1Q9BYJ9 559 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 LYRM4Q9HD34 91 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 UCKL1Q9NWZ5 548 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 GALR3O60755 368 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC35E2P0CK97 266 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 PSMA1P25786 263 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 CRISP1P54107 249 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 DEFA1P59665 94 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 DEFA3P59666 94 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 MYBPC1Q00872 1141 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 SLC27A4Q6P1M0 643 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 KBTBD8Q8NFY9 601 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 CHCHD6Q9BRQ6 235 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 HOXD1Q9GZZ0 328 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 IKZF5Q9H5V7 419 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 USP36Q9P275 1121 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 TRAPPC13A5PLN9 417 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 PRR23D1E9PI22 279 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 CPNE3O75131 537 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 PRR23D2P0DMB1 279 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 C7P10643 843 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 PRPH2P23942 346 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 SSTR4P31391 388 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 KIAA0040Q15053 153 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 PTRH1Q86Y79 214 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 BTBD2Q9BX70 525 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 NMNAT1Q9HAN9 279 aaPredicted RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 CNOT11Q9UKZ1 510 aaKnown RBP13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 CBLCQ9ULV8 474 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 PATJQ8NI35 1801 aa13.56□□□□□ -0.24
PDLIM2-201ENST00000265810 CASC3O15234 703 aaKnown RBP13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 PROM1O43490 865 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 SIGLEC6O43699 453 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 RENP00797 406 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 GIMD1P0DJR0 217 aa13.55□□□□□ -0.24
PDLIM2-201ENST00000265810 PGCP20142 388 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms