RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 EXTL1Q92935 676 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 LRRC58Q96CX6 371 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 SLC35A4Q96G79 324 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 C16orf58Q96GQ5 468 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 SH2D2AQ9NP31 389 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 ARL8BQ9NVJ2 186 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 STMN3Q9NZ72 180 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 TAGLN3Q9UI15 199 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 PCDHGB6Q9Y5F9 930 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 SNX8Q9Y5X2 465 aa13.18□□□□□ -0.3
SSBP1-201ENST00000265304 A8MUI8 341 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 MRASO14807 208 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 TSPAN2O60636 221 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 TNFRSF21O75509 655 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 OR2J2O76002 312 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 UNC5CO95185 931 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 AGR2O95994 175 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 ALPPP05187 535 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 FREM3P0C091 2139 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 PIGAP37287 484 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 MNAT1P51948 309 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 CORO7P57737 925 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 TP53BP2Q13625 1128 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 LASP1Q14847 261 aaKnown RBP13.17□□□□□ -0.3
SSBP1-201ENST00000265304 NTRK2Q16620 822 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 DUSP5Q16690 384 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 COL28A1Q2UY09 1125 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 GTDC1Q4AE62 458 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 ABHD17BQ5VST6 288 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 HLA-DQA1Q5Y7H0 255 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 REP15Q6BDI9 236 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 OPN5Q6U736 354 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 DHDDSQ86SQ9 333 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 TAGAPQ8N103 731 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 SIRT6Q8N6T7 355 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 LSM14AQ8ND56 463 aaKnown RBP13.17□□□□□ -0.3
SSBP1-201ENST00000265304 OR8J3Q8NGG0 315 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 SGCZQ96LD1 299 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 SECISBP2Q96T21 854 aaKnown RBP13.17□□□□□ -0.3
SSBP1-201ENST00000265304 HOPXQ9BPY8 73 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-201ENST00000265304 CPPED1Q9BRF8 314 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-201ENST00000265304 BTBD2Q9BX70 525 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 RAD21L1Q9H4I0 556 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 GID8Q9NWU2 228 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 THUMPD1Q9NXG2 353 aaKnown RBP13.17□□□□□ -0.3
SSBP1-201ENST00000265304 FAF1Q9UNN5 650 aaPredicted RBP13.17□□□□□ -0.3
SSBP1-201ENST00000265304 PCDHGB3Q9Y5G1 929 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 NPFFR2Q9Y5X5 522 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 CFAP46Q8IYW2 2715 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 HEATR5AQ86XA9 2040 aa13.17□□□□□ -0.3
SSBP1-201ENST00000265304 OR6C70A6NIJ9 312 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 CCT8L1PA6NM43 557 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 ERVH48-1M5A8F1 160 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 HMGN4O00479 90 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 NME6O75414 186 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-201ENST00000265304 ALOX5P09917 674 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 MATN1P21941 496 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 SLC6A2P23975 617 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 ABCD3P28288 659 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 GZMMP51124 257 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 SSR4P51571 173 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 NR0B1P51843 470 aaKnown RBP13.16□□□□□ -0.3
SSBP1-201ENST00000265304 PNLIPRP2P54317 469 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 RGNQ15493 299 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 ZNHIT3Q15649 155 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-201ENST00000265304 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.16□□□□□ -0.3
SSBP1-201ENST00000265304 SPDYE7PQ495Y7 208 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 NANOGP8Q6NSW7 305 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 PCSK4Q6UW60 755 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 NET1Q7Z628 596 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-201ENST00000265304 RNF130Q86XS8 419 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 SLC34A3Q8N130 599 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 CLEC4FQ8N1N0 589 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 POU5F2Q8N7G0 328 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 GOLM1Q8NBJ4 401 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 OR5AK3PQ8NH89 298 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 SLC22A8Q8TCC7 542 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 OIT3Q8WWZ8 545 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 PMM1Q92871 262 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 RCN3Q96D15 328 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 MAGED4Q96JG8 741 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 OR7D2Q96RA2 312 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 SH3GL1Q99961 368 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 SAP130Q9H0E3 1048 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 IKZF5Q9H5V7 419 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 KAT8Q9H7Z6 458 aaKnown RBP13.16□□□□□ -0.3
SSBP1-201ENST00000265304 NANOGQ9H9S0 305 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 ZBTB20Q9HC78 741 aaPredicted RBP13.16□□□□□ -0.3
SSBP1-201ENST00000265304 CORO2BQ9UQ03 480 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 LIPT1Q9Y234 373 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 ZNF451Q9Y4E5 1061 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 BSNQ9UPA5 3926 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 DNAJC13O75165 2243 aa13.16□□□□□ -0.3
SSBP1-201ENST00000265304 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
SSBP1-201ENST00000265304 ANKRD33BA6NCL7 494 aa13.15□□□□□ -0.3
SSBP1-201ENST00000265304 A6NL46 340 aa13.15□□□□□ -0.3
SSBP1-201ENST00000265304 WWP2O00308 870 aa13.15□□□□□ -0.3
SSBP1-201ENST00000265304 PPM1BO75688 479 aa13.15□□□□□ -0.3
SSBP1-201ENST00000265304 NEURL1O76050 574 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms