RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 NR2F1P10589 423 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 LIFP15018 202 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CD82P27701 267 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 RFX3P48380 749 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 SLC26A5P58743 744 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 PSG6Q00889 435 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 PUM1Q14671 1186 aaKnown RBP eCLIP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 SSPNQ14714 243 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 MYBPC3Q14896 1274 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 GPAT3Q53EU6 434 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CT45A2Q5DJT8 189 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 FIGNL1Q6PIW4 674 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 PTRH1Q86Y79 214 aaKnown RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 LGI4Q8N135 537 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CDRT4Q8N9R6 151 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 C11orf65Q8NCR3 313 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 B3GNT7Q8NFL0 401 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 OR7G1Q8NGA0 311 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ZG16BQ96DA0 208 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ZNF578Q96N58 590 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 RSPO3Q9BXY4 272 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 GPR87Q9BY21 358 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ZNF700Q9H0M5 742 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 PIGUQ9H490 435 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 TMEM38AQ9H6F2 299 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 GPN2Q9H9Y4 310 aaPredicted RBP9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 ZNF160Q9HCG1 818 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 A4GALTQ9NPC4 353 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 COPS7AQ9UBW8 275 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 SNX13Q9Y5W8 968 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 V9GYQ6 96 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 DOCK10Q96BY6 2186 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 MED13Q9UHV7 2174 aa9.03□□□□□ -0.96
SNRNP40-201ENST00000263694 CELSR3Q9NYQ7 3312 aa9.02□□□□□ -0.96
SNRNP40-201ENST00000263694 ASPMQ8IZT6 3477 aa9.02□□□□□ -0.96
SNRNP40-201ENST00000263694 NPIPA5A0A0B4J1W7 369 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 TRBV11-1A0A0K0K1C0 115 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 NPIPA7E9PJI5 369 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 H0YHG0 523 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 FCMRO60667 390 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 NKX2-2O95096 273 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 H6PDO95479 791 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 SERPINA1P01009 418 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 IGKV1D-16P01601 117 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 CD63P08962 238 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 IFI6P09912 130 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 NPIPA8P0DM63 369 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 WT1P19544 449 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 PCGF2P35227 344 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 PLA2G5P39877 138 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 RNF144AP50876 292 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 CRYBA2P53672 197 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 ACTR3P61158 418 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 RNF4P78317 190 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 TRAP1Q12931 704 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 BNIP2Q12982 314 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 FXNQ16595 210 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 BTBD16Q32M84 506 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 SPATS1Q496A3 300 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 CYP27C1Q4G0S4 372 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 LRRC23Q53EV4 343 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 DESI1Q6ICB0 168 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 ERICH5Q6P6B1 374 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 C16orf62Q7Z3J2 963 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 ZAR1Q86SH2 424 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 SPATA24Q86W54 205 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 PRR22Q8IZ63 422 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 FAM86B1Q8N7N1 296 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 COX18Q8N8Q8 333 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 HOXB13Q92826 284 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 WNT2BQ93097 391 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 FAM162AQ96A26 154 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 ADIPOR1Q96A54 375 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 RMND5BQ96G75 393 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 ART5Q96L15 291 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 IMMP1LQ96LU5 166 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 LMF2Q9BU23 707 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 SEMA4CQ9C0C4 833 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 WWTR1Q9GZV5 400 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 QRSL1Q9H0R6 528 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 NXF5Q9H1B4 397 aaKnown RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 ACTR3BQ9P1U1 418 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 P2RX2Q9UBL9 471 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 MKLN1Q9UL63 735 aa9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 GPR55Q9Y2T6 319 aaPredicted RBP9.02□□□□□ -0.97
SNRNP40-201ENST00000263694 C2orf92A0A1B0GVN3 265 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 TCRBV5S2A0A599 114 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 TMEM200CA6NKL6 621 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 C5orf58C9J3I9 102 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 M0QX08 132 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 PGM3O95394 542 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 IGHEP01854 428 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 CYC1P08574 325 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 LIPCP11150 499 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 KDELR2P33947 212 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 ID4P47928 161 aa9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 NR0B1P51843 470 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 POU6F2P78424 691 aaPredicted RBP9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 MRPS22P82650 360 aaKnown RBP9.01□□□□□ -0.97
SNRNP40-201ENST00000263694 CHRNEQ04844 493 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms