RNA–Protein interactions for RNA: ENST00000262213.6

TRAM1-201, Transcript of translocation associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAM1, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-201ENST00000262213 NNMTP40261 264 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 NCBP2P52298 156 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAM1-201ENST00000262213 SF3A2Q15428 464 aaKnown RBP16.42■□□□□ 0.22
TRAM1-201ENST00000262213 BCL2L15Q5TBC7 163 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 SDE2Q6IQ49 451 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 FAM129CQ86XR2 697 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF547Q8IVP9 402 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 FGF11Q92914 225 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 TCEAL4Q96EI5 215 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 MED30Q96HR3 178 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 COQ7Q99807 217 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 GLIPR2Q9H4G4 154 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 SLC28A3Q9HAS3 691 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 PTGFRNQ9P2B2 879 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 MOSPD1Q9UJG1 213 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 ZFR2Q9UPR6 939 aaKnown RBP16.42■□□□□ 0.22
TRAM1-201ENST00000262213 KCNE3Q9Y6H6 103 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 CSNK1G3Q9Y6M4 447 aa16.42■□□□□ 0.22
TRAM1-201ENST00000262213 FABP7O15540 132 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 OR1F1O43749 312 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 ALDH1A1P00352 501 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 FGF9P31371 208 aaPredicted RBP16.41■□□□□ 0.22
TRAM1-201ENST00000262213 MAPK9P45984 424 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 GPR4P46093 362 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 EFNB1P98172 346 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 NDUFA9Q16795 377 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 TIGD3Q6B0B8 471 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 SLC38A6Q8IZM9 456 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 GHDCQ8N2G8 530 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 PCNPQ8WW12 178 aaKnown RBP16.41■□□□□ 0.22
TRAM1-201ENST00000262213 ZFPM2Q8WW38 1151 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 C16orf58Q96GQ5 468 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 MAP6Q96JE9 813 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 SECISBP2Q96T21 854 aaKnown RBP16.41■□□□□ 0.22
TRAM1-201ENST00000262213 FAM83CQ9BQN1 747 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 MS4A8Q9BY19 250 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF222Q9UK12 451 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 CLEC4AQ9UMR7 237 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 LZTS3O60299 673 aaPredicted RBP16.41■□□□□ 0.22
TRAM1-201ENST00000262213 ACP5P13686 325 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 SYN1P17600 705 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 FCN2Q15485 313 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 PIP5KL1Q5T9C9 394 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 MZT2AQ6P582 158 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 KRT74Q7RTS7 529 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 CCDC28AQ8IWP9 274 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 SLC39A11Q8N1S5 342 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 ARMC5Q96C12 935 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 ZG16BQ96DA0 208 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 PRRC1Q96M27 445 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 FCRL4Q96PJ5 515 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 C17orf62Q9BQA9 187 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 SOSTQ9BQB4 213 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 MARVELD1Q9BSK0 173 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 LHX9Q9NQ69 397 aa16.41■□□□□ 0.22
TRAM1-201ENST00000262213 GPR55Q9Y2T6 319 aaPredicted RBP16.41■□□□□ 0.22
TRAM1-201ENST00000262213 LILRB5O75023 590 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 SLC43A1O75387 559 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 HLA-DQB1P01920 261 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 HLA-DPB1P04440 258 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 TRIM23P36406 574 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 TM4SF4P48230 202 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 C19orf57Q0VDD7 668 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 GPR176Q14439 515 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ENTPD8Q5MY95 495 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 LHX8Q68G74 356 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ANKRD54Q6NXT1 300 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 FAM20CQ8IXL6 584 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 SMG7Q92540 1137 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 IRF7Q92985 503 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ZC3HAV1LQ96H79 300 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ISG20L2Q9H9L3 353 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ABT1Q9ULW3 272 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 WNT6Q9Y6F9 365 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 CDH10Q9Y6N8 788 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ZC3H12DA2A288 527 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 AKAP8O43823 692 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ADAM15Q13444 863 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 ZNF658BQ4V348 819 aaPredicted RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 SLC25A30Q5SVS4 291 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 VRK2Q86Y07 508 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 LIX1LQ8IVB5 337 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 FBXO15Q8NCQ5 510 aaPredicted RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 BBS4Q96RK4 519 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 DPH7Q9BTV6 452 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 TRMT61BQ9BVS5 477 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 GTPBP2Q9BX10 602 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 DDX31Q9H8H2 851 aaKnown RBP16.4■□□□□ 0.22
TRAM1-201ENST00000262213 SEMA4GQ9NTN9 838 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 TAS2R7Q9NYW3 318 aa16.4■□□□□ 0.22
TRAM1-201ENST00000262213 A0A1W2PS29 197 aa16.39■□□□□ 0.21
TRAM1-201ENST00000262213 SOCS6O14544 535 aa16.39■□□□□ 0.21
TRAM1-201ENST00000262213 C8AP07357 584 aa16.39■□□□□ 0.21
TRAM1-201ENST00000262213 SRP9P49458 86 aaKnown RBP16.39■□□□□ 0.21
TRAM1-201ENST00000262213 ZNF155Q12901 538 aaPredicted RBP16.39■□□□□ 0.21
TRAM1-201ENST00000262213 CD300LDQ6UXZ3 194 aa16.39■□□□□ 0.21
TRAM1-201ENST00000262213 NR2C2APQ86WQ0 139 aa16.39■□□□□ 0.21
TRAM1-201ENST00000262213 NUDT13Q86X67 352 aa16.39■□□□□ 0.21
TRAM1-201ENST00000262213 KLHL36Q8N4N3 616 aa16.39■□□□□ 0.21
TRAM1-201ENST00000262213 OR51G2Q8NGK0 314 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms