RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 TMEM205Q6UW68 189 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 C16orf89Q6UX73 402 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 C6orf120Q7Z4R8 191 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 NUP43Q8NFH3 380 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 CHPT1Q8WUD6 406 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 WDR77Q9BQA1 342 aaPredicted RBP25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 THTPAQ9BU02 230 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 SERHL2Q9H4I8 314 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 HS3ST3B1Q9Y662 390 aa25.59■■□□□ 1.69
SMARCD3-201ENST00000262188 PCSK6P29122 969 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 MSX2P35548 267 aaPredicted RBP25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 ELAVL1Q15717 326 aaKnown RBP25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 TRIML2Q8N7C3 387 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 FAM156AQ8NDB6 213 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 OR52R1Q8NGF1 315 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 ZNF675Q8TD23 568 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 BCAP29Q9UHQ4 241 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 PADI2Q9Y2J8 665 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 MVDP53602 400 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 MAP4K2Q12851 820 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 SAXO2Q658L1 398 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 CPEB2Q7Z5Q1 589 aaKnown RBP25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 ULK2Q8IYT8 1036 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 OR2L13Q8N349 312 aa25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 SENP5Q96HI0 755 aaPredicted RBP25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 HOPXQ9BPY8 73 aaPredicted RBP25.58■■□□□ 1.69
SMARCD3-201ENST00000262188 PCSK5Q92824 1860 aa25.58■■□□□ 1.68
SMARCD3-201ENST00000262188 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 PLOD2O00469 737 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 EMC8O43402 210 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 DDAH2O95865 285 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 CLPSP04118 112 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 LIPCP11150 499 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 HSPA13P48723 471 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 LASP1Q14847 261 aaKnown RBP25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 C1orf146Q5VVC0 180 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 TNFAIP8L2Q6P589 184 aaPredicted RBP25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 CATSPER1Q8NEC5 780 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 SLC2A12Q8TD20 617 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 GIMAP5Q96F15 307 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 ZNF639Q9UID6 485 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 DTX4Q9Y2E6 619 aa25.57■■□□□ 1.68
SMARCD3-201ENST00000262188 NPPAP01160 153 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 HMGN2P05204 90 aaKnown RBP25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 NUDT7P0C024 238 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 LIFP15018 202 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 TCN1P20061 433 aaPredicted RBP25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 PAPD4Q6PIY7 484 aaKnown RBP25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 PPP1R32Q7Z5V6 425 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 OR5D16Q8NGK9 328 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 DNAJB8Q8NHS0 232 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 GPN2Q9H9Y4 310 aaPredicted RBP25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 SPAG4Q9NPE6 437 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 C21orf140B9A014 251 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 PLOD3O60568 738 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 ETFAP13804 333 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 KIRREL2Q6UWL6 708 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 TMEM64Q6YI46 380 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 IFNEQ86WN2 208 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 OR10A6Q8NH74 314 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 NEURL3Q96EH8 262 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 C3orf14Q9HBI5 128 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 PTGFRNQ9P2B2 879 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 TMEM181Q9P2C4 612 aa25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 C19orf53Q9UNZ5 99 aaPredicted RBP25.56■■□□□ 1.68
SMARCD3-201ENST00000262188 SOCS6O14544 535 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 CRATP43155 626 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 AQP4P55087 323 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 CEACAM7Q14002 265 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 BNC2Q6ZN30 1099 aaPredicted RBP25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 GPR155Q7Z3F1 870 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 ZNF721Q8TF20 911 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 PELOQ9BRX2 385 aaKnown RBP25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 NUDT9Q9BW91 350 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 NDEL1Q9GZM8 345 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 CEP295Q9C0D2 2601 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 PRORSD1PA6NEY8 169 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 MMP11P24347 488 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 PRR5P85299 388 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 PCOLCEQ15113 449 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 HORMAD2Q8N7B1 307 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 OR8J3Q8NGG0 315 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 RAB8BQ92930 207 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 ZNF578Q96N58 590 aaPredicted RBP25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 GPR87Q9BY21 358 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 GRIP2Q9C0E4 1043 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 MSRB2Q9Y3D2 182 aa25.55■■□□□ 1.68
SMARCD3-201ENST00000262188 CELA2AP08217 269 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 EIF2B2P49770 351 aaKnown RBP25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 FUT7Q11130 342 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 BIKQ13323 160 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 RGNQ15493 299 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 ATP1A1-AS1Q5TC04 95 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 SFXN5Q8TD22 340 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 FBXL20Q96IG2 436 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 SLC35G5Q96KT7 338 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 OR10A5Q9H207 317 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 KAT8Q9H7Z6 458 aaKnown RBP25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 ABCD2Q9UBJ2 740 aa25.54■■□□□ 1.68
SMARCD3-201ENST00000262188 SLC7A8Q9UHI5 535 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms